FC918242

Overview
NameFC918242
Unique NameFC918242
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: SCPA_TRITO (Carboxypeptidase S1 homolog A OS=Trichophyton tonsurans GN=SCPA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 46/182 (25.27%), Postives = 72/182 (39.56%), Query Frame = 3
Query:  456 FYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTT-------------SDYNCG------------------------DASTARDMHVFMMNWYEKFPEFK--SRELFLTGESYAGHYIPQLADVLLHHNAHSKGFQV 884
            F++F EA  +P   PL++WLN            F E GP +   D +    N+ SWN   N+L+++ P  VG+SY   T             +D++ G                          + AR +  F   W+++FPE K  + ++ +  ESY G Y P  A      N   K   +
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSMIGL-FQENGPCWINDDSKSTTNNTFSWNNKVNMLYIDQPNQVGFSYDELTNITYSTINDTVYVADFSNGVPAQNLSTLVGTGSSQNPWATANNTVNAARSIWHFAQVWFQEFPEHKPNNNKISIWTESYGGRYGPSFASYFQEQNEKIKNHTI 263          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: PEPS_ASPSA (Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpdS PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 47/175 (26.86%), Postives = 80/175 (45.71%), Query Frame = 3
Query:  390 PKVAF---RQYAGYVDVDVKNGRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPE---FKSRELFLTGESYAGHYIPQLADVLLHHN----AHSKGFQV 884
            P+V F     YAG +        SLF++F  ++       +T+WLN              E GPF  +        N  SW   +N+++++ PAG G+S   +T        +   D+     +W++ F +      R++++TGESYAG Y+P +AD +L+       + KG Q+
Sbjct:   68 PEVDFDVGESYAGLLPNTPTGNSSLFFWFFPSQNPDASDEITIWLNGGPGCSSLDGL-LQENGPFLWQPGTYKPVPNPYSWTNLTNVVYIDQPAGTGFSPGPST-------VNDEEDVAAQFNSWFKHFVDTFDLHGRKVYITGESYAGMYVPYIADAMLNEEDTTYFNLKGIQI 234          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.253e-11
Identity = 27/51 (52.94%), Postives = 39/51 (76.47%), Query Frame = 3
Query:  708 GDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            GD  TA D + F++NW E+FP++K R+ ++ GESYAGHY+PQL+  L+H N
Sbjct:    8 GDNKTAHDSYAFLVNWLERFPQYKYRDFYIAGESYAGHYVPQLSQ-LVHRN 57          
BLAST of FC918242 vs. ExPASy Swiss-Prot
Match: PEPF_ASPNG (Serine-type carboxypeptidase F OS=Aspergillus niger GN=pepF PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 9.473e-11
Identity = 51/165 (30.91%), Postives = 76/165 (46.06%), Query Frame = 3
Query:  369 VVSLPGQPKVAFRQYAGYVDVDVKN-GRSLFYYFVEAEVEPHEKPLTLWLNXXXXXXXXXXXAFTELGPFYPRGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTTSDYNCGDASTARDMHVFMMNWYEKFPEFKSRELFLTGESYAGHYIPQLADVLLHHN 860
            V SLP         Y+G V ++  N  RSLF+ F     EP ++ +T+WLN              E G F  +        N  SW   +N+L+V+ P G G+S    T+     +   A D   F  NW + F   K+ ++++TGESYAG Y+P ++   L  N
Sbjct:   70 VESLPDVHFDLGEMYSGLVPIEKGNVSRSLFFVFQPTIGEPVDE-ITIWLNGGPGCSSLEAF-LQENGRFVWQPGTYQPVENPYSWVNLTNVLWVDQPVGTGFSLGVPTAT---SEEEIAEDFVKFFKNWQQIFG-IKNFKIYVTGESYAGRYVPYISAAFLDQN 228          
The following BLAST results are available for this feature:
BLAST of FC918242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 94
Match NameE-valueIdentityDescription
SCPA_TRITO4.252e-1125.27Carboxypeptidase S1 homolog A OS=Trichophyton tons... [more]
PEPS_ASPSA4.252e-1126.86Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpd... [more]
CBP21_HORVU7.253e-1152.94Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
PEPF_ASPNG9.473e-1130.91Serine-type carboxypeptidase F OS=Aspergillus nige... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA62BH08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA62BH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC918242 ID=FC918242; Name=FC918242; organism=Citrus clementina; type=EST; length=885bp
ATTTTCAAAGATGCTTTGCGTTTATTTAGTTTAATTATCCATTAGTATCT
TTTTGTTAAAGTAGACCCAGAATTCACGTGACTGGTGTAACAGAATTTGT
TTGATAAAGATATACAAGGGAATTATTATCATCCATGATTTTTAATACAT
ATAACTCTTTATAGGTTGCTTTTGGTTTCATTATCATTATATATTTGAAC
GTGCAATTCCATCTAAATGAATGTACATGTGAGCTTCCCGTGACAAATCT
TGAGATGGGTAGGTGGTGTTTTGGTGGGTTCTTGAATATTTCTTTAGTGT
TGTTGTTGTTGTTGTTGGTGAGTAGAAGTAATGTTGCATACGTGGCGGCG
TTCCCGGCGGAGGATCTGGTGGTGAGCTTGCCGGGGCAACCGAAGGTTGC
CTTCAGGCAATATGCTGGCTATGTTGATGTTGATGTCAAAAATGGCAGAA
GCTTGTTTTACTACTTTGTTGAAGCTGAAGTCGAACCGCATGAGAAACCT
CTCACTCTTTGGCTTAATGGAGGCCCAGGTTGCTCTTCTGTTGGAGGAGG
TGCTTTCACAGAATTGGGTCCATTTTATCCAAGAGGTGATGGCCGGGGCC
TTAGAAGGAATTCGATGTCATGGAATAAAGCATCAAATCTTCTCTTTGTT
GAGTCTCCTGCTGGAGTTGGATGGTCATACTCAAATACAACTTCTGACTA
TAATTGCGGGGATGCCTCCACTGCCAGGGATATGCATGTATTTATGATGA
ACTGGTATGAAAAATTCCCAGAATTCAAGTCAAGAGAATTGTTTCTTACA
GGGGAAAGCTATGCAGGTCATTACATACCGCAGTTGGCTGACGTTCTGCT
GCACCATAATGCACATTCAAAGGGGTTTCAAGTTT
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