FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP446_ARATH (Pentatricopeptide repeat-containing protein At5g65570 OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18 Identity = 58/222 (26.13%), Postives = 109/222 (49.10%), Query Frame = 1 Query: 187 FTDYRLPRQAKQLHARLIFHSVAPDN-FLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 F+D L ++A++ H + + N F+ S L++ Y K +A+ V D++ K + A+++ YS T+ ++ F S+ + ++P+ +T VL + G +D K +H +++ G +S+L L+T Y RC V + +F + + VSW S+I+G Q G E FR+M+ + +P+ T+ S L C + G ++H Sbjct: 175 FSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLV---EKVQPNEYTYASVLISC-GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSI-KPNSFTLSSALRGCSNLAMFEEGRQIH 391 HSP 2 Score: 85.1149 bits (209), Expect = 5.379e-16 Identity = 60/229 (26.20%), Postives = 113/229 (49.34%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLD-SSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 + +L++ D R K + A ++ S P SKL++ K + AR VFD ++ + I ++N+++ H + + ++ + ++ ++ PD +T++ V KA + L + A+ H + GL+ S++F+ + L+ Y + A+ + D + +D+V ++I GYSQ G E F+ ML V +P+ T SVL +CG DI G +H Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHML-KSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN---NVLPDEYTLSSVFKAFSDLSLEKE-AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV-QPNEYTYASVLISCGNLKDIGNGKLIH 290 HSP 3 Score: 84.3445 bits (207), Expect = 9.175e-16 Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 457 LKPDNFTITCVLKALTGL--FRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 +KP++FT++ L+ + L F + R ++H V + G D + +GLI Y +C AR +FD +S D++S N+MI Y+Q GF E LF M+N L+P+ VTV+SVL AC S + G E+ Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGR---QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG-LQPNDVTVLSVLLACNNSRLVEEGCEL 491
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18 Identity = 59/213 (27.70%), Postives = 111/213 (52.11%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINF--YSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQ+ A++I + + D F +S+LI F S+S L + + I + +IFS+N + +S + ++ L+ + + +PD+FT + K L R S + +VL+ L+ + N I ++ C D+ +AR +FD RD+VSWN +I GY + G E+ +++ ++ S ++PD VT++ ++ +C D+ G E + Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL-RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYK-LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280 HSP 2 Score: 88.1965 bits (217), Expect = 6.354e-17 Identity = 55/219 (25.11%), Postives = 102/219 (46.58%), Query Frame = 1 Query: 283 INFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVL------------------------------RPDGVTVVSVLHACGQSSDIVFGMEVH 849 I+ ++ + AR VFD+ + + S+N ++ Y + ++ + S + +KPD+ T+ ++ + + + D KE + YV GL ++ LVN L+ +S+C D+ AR +FD + R IVSW +MI+GY++ G + + LF +M V+ +PD +T++ L AC Q + G+ +H Sbjct: 198 IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES---EGVKPDDVTMIGLVSSCS-MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412 HSP 3 Score: 72.0182 bits (175), Expect = 4.712e-12 Identity = 51/206 (24.76%), Postives = 101/206 (49.03%), Query Frame = 1 Query: 229 ARLIFHSVAPDNFLA-SKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 AR IF ++ ++ + +I+ Y++ L +R +FD + K + +NAM+ D L LF + +S + KPD T+ L A + L +H Y+ + L ++ L L+ Y++C +++ A ++F G+ R+ +++ ++I G + G + F EM+++ + PD +T + +L AC I G + Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS---NTKPDEITMIHCLSACSQLGALD-VGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGI-APDEITFIGLLSACCHGGMIQTGRD 511
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.369e-18 Identity = 64/195 (32.82%), Postives = 93/195 (47.69%), Query Frame = 1 Query: 229 ARLIFHSVAPDNFLA-SKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 ARL+F + N + + +I+ Y +S + A +FDK+ + + S+ AM+ + + L F + S +KPD I L A T L S F VH YVL +++ + N LI Y RC V AR +F M R +VSWNS+I G++ G E FR+M +PD VT L AC Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS---GVKPDYVAIIAALNACTNLGALS-FGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM-QEKGFKPDAVTFTGALTAC 317 HSP 2 Score: 69.3218 bits (168), Expect = 3.054e-11 Identity = 58/193 (30.05%), Postives = 90/193 (46.63%), Query Frame = 1 Query: 283 INFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAY-SVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLF-RDSRFAKE--VHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 IN +++ L +A F +T + + IA S +T L Y+ L D + V A+ G++ + RF K V Y+ D + N +I Y R V +A +FD M RD++SW +MI G+ + G+ EE FREM S V +PD V +++ L+AC + FG+ VH Sbjct: 43 INLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVM-VGTAIIGMYSKRGRFKKARLVFDYME----DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGV-KPDYVAIIAALNACTNLGALSFGLWVH 229
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR73_ARATH (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E58 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18 Identity = 59/219 (26.94%), Postives = 108/219 (49.32%), Query Frame = 1 Query: 190 TDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 +D R + KQ A I ++ + I+ +SK N L + +F ++ N+M+ +YS H D LRLF + +Q ++PD FT + VL ++ + D +VHS V++ G D + L+ Y + V A +F +D++ WN++I G ++ E A+F ++L + L+PD VT++ +L AC + + G+++ Sbjct: 258 SDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF---ILAMTQSVRPDKFTFSSVLSSMNAVMLDH--GADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQI 471
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18 Identity = 70/276 (25.36%), Postives = 117/276 (42.39%), Query Frame = 1 Query: 175 LIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSN----SLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKAL--TGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCD---------------------------------------------DVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 L + R R Q+HA I D A++++ F + S+ L A +F+++ ++ FS+N ++ +S D + + + ++P+ FT VLKA TG ++ K++H L+ G F+++ L+ Y C D +AR LFD M R +VSWN+MI+GYS GF+++ +FREM + RP+ VT+VSVL A + + G +H Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG---KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI-RPNYVTLVSVLPAISRLGSLELGEWLH 297 HSP 2 Score: 78.1814 bits (191), Expect = 6.576e-14 Identity = 47/177 (26.55%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 280 LINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 +I+ Y + AR +FDK+ +S+ S+N M+ YS++ + D + +F + D++P+ T+ VL A++ L + +H Y G+ L + LI YS+C + A +F+ + ++++W++MI G++ G + F +M + V RP V +++L AC Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG---DIRPNYVTLVSVLPAISRL-GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGV-RPSDVAYINLLTAC 385
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP345_ARATH (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18 Identity = 58/216 (26.85%), Postives = 111/216 (51.39%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKE---VHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 ++ ++H I + + + I Y+K +L A+ F+ IT + I S+NAM+ ++ + + L++F S A+ + P+ +T VL A+ F + K+ H+++L+ GL+S + + L+ Y++ ++ + +F+ MS ++ W S+I+ YS G +E LF +M+ V PD VT +SVL AC + + G E+ Sbjct: 389 KEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAA----ETMPNEYTFGSVLNAIA--FAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA-PDLVTFLSVLTACNRKGMVDKGYEI 597 HSP 2 Score: 81.6481 bits (200), Expect = 5.947e-15 Identity = 53/195 (27.18%), Postives = 94/195 (48.21%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQ-GGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +++ ++ Y K+ A +F+ + + S+N +L + + + + + S + D FT + L G ++ S V++ GL+S L + N IT YSR AR +FD MS +D++SWNS+++G SQ G F E +FR+M+ V D V+ SV+ C +D+ ++H Sbjct: 113 VSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVF------DAFTYSTALSFCVGS-EGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV-ELDHVSFTSVITTCCHETDLKLARQIH 299 HSP 3 Score: 77.0258 bits (188), Expect = 1.465e-13 Identity = 53/211 (25.12%), Postives = 110/211 (52.13%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMY-TDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 QL + ++ + D + + I YS+S S AR VFD+++ K + S+N++L S + + + +F + + ++ D+ + T V+ D + A+++H ++ G +S L + N L++ YS+C + + +++F MS R++VSW +MI+ ++ ++F M V P+ VT V +++A + I G+++H Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM---MREGVELDHVSFTSVITTCCH-ETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFDGVY-PNEVTFVGLINAVKCNEQIKEGLKIH 395 HSP 4 Score: 69.707 bits (169), Expect = 2.339e-11 Identity = 52/215 (24.19%), Postives = 105/215 (48.84%), Query Frame = 1 Query: 184 HFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDI 828 H TD +L RQ L + + S+ + + L++ YSK L + VF +++ +++ S+ M+ + D + +F ++ + P+ T ++ A+ + ++H ++ G S + N IT Y++ + + A+ F+ ++ R+I+SWN+MI+G++Q GF E +F + + P+ T SVL+A + DI Sbjct: 288 HETDLKLARQIHGLCIKRGYESLLE---VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMRFD---GVYPNEVTFVGLINAVK-CNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDI 488
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.400e-18 Identity = 61/182 (33.52%), Postives = 95/182 (52.20%), Query Frame = 1 Query: 211 QAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCD--DVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM 750 Q KQLHA++I ++ D +A KLI+ S A VF+++ ++ N+++ A++ + +FS + L DNFT +LKA +G K +H+++ + GL S +++ N LI YSRC V A LF+ MS RD VSWNSM+ G + G + + LF EM Sbjct: 34 QVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF---GLFADNFTYPFLLKACSGQ-SWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211 HSP 2 Score: 84.7297 bits (208), Expect = 7.025e-16 Identity = 55/194 (28.35%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 274 SKLINFYSKSNSLIQARHVFDK--ITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALT--GLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 S ++ YSK+ + AR +FDK + +K++ ++ ++ Y+ + + RL + +S LK D + +L A T GL +HS + R L S+ +++N L+ Y++C ++ A +F+ + +D+VSWN+M+ G G +E LF M + RPD VT ++VL +C + I G++ Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS---GLKFDAAAVISILAACTESGLLS---LGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI-RPDKVTFIAVLCSCNHAGLIDEGID 437
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP229_ARATH (Pentatricopeptide repeat-containing protein At3g14330 OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.747e-18 Identity = 61/197 (30.96%), Postives = 103/197 (52.28%), Query Frame = 1 Query: 268 LASKLINFYSKSNSLIQARHVFDKITSKSIFS---YNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 L SKLI +S L AR +FD +T S+ + + AM I YS + D L ++ + S+ ++P NF+I+ LKA L +D R + +H+ +++ + N L+ Y AR +FDGMS R++V+WNS+I+ S+ E LFR+M ++ T+ ++L AC + + ++ G E+H Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSF---IEPGNFSISVALKACVDL-KDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKM-QEEMIGFSWATLTTILPACSRVAALLTGKEIH 360 HSP 2 Score: 90.5077 bits (223), Expect = 1.280e-17 Identity = 58/217 (26.73%), Postives = 106/217 (48.85%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYS----VHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 R + +HA+++ D + + L+ Y +S AR VFD ++ +++ ++N+++ S VH+M+ ++ + L + V LTG KE+H+ +L+ + L+N L+ Y +C +V +R +FD M +D+ SWN M+ Y+ G EE LF M+ S V PDG+T V++L C + +G+ + Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG--------KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV-APDGITFVALLSGCSDTGLTEYGLSL 460
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.747e-18 Identity = 59/215 (27.44%), Postives = 109/215 (50.70%), Query Frame = 1 Query: 205 PRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 P+Q K++HA ++ + N L ++L+ + AR VFD++ IF +N + Y + + ++L L+ + ++PD FT V+KA++ L D +H++V++ G + L+ Y + +++SA LF+ M +D+V+WN+ +A Q G F +M + ++ D TVVS+L ACGQ + G E++ Sbjct: 24 PKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMR---DLGVRPDEFTYPFVVKAISQL-GDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMC-ADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233 HSP 2 Score: 88.9669 bits (219), Expect = 3.725e-17 Identity = 55/199 (27.64%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 223 LHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 LHA ++ + +A++L+ Y K L A +F+ + K + ++NA L L F+ + + Q D+FT+ +L A G +E++ + +D ++ + N + + +C + +AR LF+ M R++VSW++MI GY+ G E LF M N LRP+ VT + VL AC + Sbjct: 131 LHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQF---DSFTVVSMLSAC-GQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG-LRPNYVTFLGVLSACSHA 324
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.506e-18 Identity = 60/200 (30.00%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 229 ARLIFHSVAPDNFLA-SKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLK--ALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 AR IF + + ++ + L++ Y S + +A+ +F ++ K+I S+ M+ + + + L+LFS + + +P ++ + +K A+ G + + + + H+ +L+ G DSSL N LIT Y++C V AR +F M D VSWN++IA Q G E ++ EML + RPD +T+++VL AC + Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR---EGFEPCDYAFSGAIKSCAVLGAYCNGQ---QYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGI-RPDRITLLTVLTACSHA 531 HSP 2 Score: 88.5817 bits (218), Expect = 4.865e-17 Identity = 65/247 (26.32%), Postives = 111/247 (44.94%), Query Frame = 1 Query: 226 HARLIFHSVA-PDNFLASKLINFYSKSNSLIQARHVFDK--ITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDD----VASARALFDGMSNRD--------------------------------IVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +AR +F ++ PD + +++ Y S + AR VF+K + + YNAM+ +S ++ + LF + + KPDNFT VL L + D + + H+ L+ G + N L++ YS+C + SAR +FD + +D +V++N+MI+GY GFY+E + R M++S + D T SV+ AC + + G +VH Sbjct: 67 YARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKH---EGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI-ELDEFTYPSVIRACATAGLLQLGKQVH 309 HSP 3 Score: 86.6557 bits (213), Expect = 1.849e-16 Identity = 65/225 (28.89%), Postives = 100/225 (44.44%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNS----LIQARHVFDKITSKS--------------------------------IFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALT--GLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVL 768 +Q Q HA + +++ L++ YSK S L AR VFD+I K + +YNAM+ Y Y + L + + SS ++ D FT V++A GL + K+VH+YVLR D S N L++ Y +C ARA+F+ M +D+VSWN++++GY G E K +F+EM +L Sbjct: 166 KQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSS---GIELDEFTYPSVIRACATAGLLQ---LGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |