FC918250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP343_ARATH (Pentatricopeptide repeat-containing protein At4g31070, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E7 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20 Identity = 63/213 (29.58%), Postives = 108/213 (50.70%), Query Frame = 1 Query: 214 AKQLHARLIFHSVAPDNFLASK-LINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 A+ HA ++ ++ L S L++ Y K + A HVFD++ K+ S+ AM+ + Y + LF ++ ++L+P+ T+ VL A L S KE+H + R G + L +T Y RC +V+ +R LF+ RD+V W+SMI+GY++ G E L +M + + VT+++++ AC S+ + F VH Sbjct: 179 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR---ENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGI-EANSVTLLAIVSACTNSTLLSFASTVH 387 HSP 2 Score: 86.2705 bits (212), Expect = 2.415e-16 Identity = 49/201 (24.38%), Postives = 101/201 (50.25%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 K++H H D L + + Y + ++ +R +F+ + + +++M+ Y+ ++ + L + + + ++ ++ T+ ++ A T S FA VHS +L+CG S + L N LI Y++C +++AR +F ++ +D+VSW+SMI Y G E +F+ M+ D + +++L AC + Sbjct: 283 KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRK---EGIEANSVTLLAIVSACTNSTLLS-FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGG-HEVDDMAFLAILSACNHA 478 HSP 3 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 57/198 (28.79%), Postives = 96/198 (48.48%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVL-RCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHAC 810 QLH + D +++ LI+ Y+K + R VFD++ + SY +++ + + + ++L + Y P + + +L T + S+ A+ H+ VL + S+ L L+ Y + DD A+A +FD M ++ VSW +MI+G YE LFR M LRP+ VT++SVL AC Sbjct: 79 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEM---YFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQREN-LRPNRVTLLSVLPAC 272
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP235_ARATH (Putative pentatricopeptide repeat-containing protein At3g15930 OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20 Identity = 65/238 (27.31%), Postives = 109/238 (45.80%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNS-------------------------------MIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 K+LH ++ + + ++ + L+ YS + AR VFD+ + +FS+N M+ Y+ Y +++ L + + + P + T+ VL A + + +D K VH YV C + SL L N L+ Y+ C ++ A +F M RD++SW S MI GY + G + E +FREM ++ ++ PD T+VSVL AC + G Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNL---VSPTSVTLLLVLSACSKV-KDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIG 387 HSP 2 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 73/233 (31.33%), Postives = 114/233 (48.93%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSK--SNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDS---RFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Y R I + Q KQLH++ I VAP+ KL F+ + A +F KI + +N M+ +S D + +RL+ ++ + + PD+ T +L GL RD K++H +V++ GL S+L++ N L+ YS C + AR +FD D+ SWN MI+GY++ YEE L EM + ++ P VT++ VL AC + D VH Sbjct: 34 YSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLK---EGVTPDSHTFPFLLN---GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERN-LVSPTSVTLLLVLSACSKVKDKDLCKRVH 259 HSP 3 Score: 74.7146 bits (182), Expect = 7.270e-13 Identity = 51/195 (26.15%), Postives = 94/195 (48.21%), Query Frame = 1 Query: 238 IFHSV-APDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 IF S+ A D + ++ Y + +L AR FD++ + S+ M+ Y + ++L +F + S+ + PD FT+ VL A L + + +Y+ + + + + + N LI Y +C A+ +F M RD +W +M+ G + G +E +F +M + + +PD +T + VL AC S Sbjct: 293 IFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSA---GMIPDEFTMVSVLTACAHL-GSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSI-QPDDITYLGVLSACNHS 482
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP231_ARATH (Pentatricopeptide repeat-containing protein At3g14730 OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.616e-20 Identity = 63/205 (30.73%), Postives = 102/205 (49.76%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGL----DSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 + +H + D +++ LI+ Y KS L +A +F+ + + +F++N++L + + TL LF + S ++PD T+T VL G R +E+H Y++ GL S+ F+ N L+ Y +C D+ AR +FD M +D SWN MI GY E +F M + V +PD +T V +L AC S Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS---GIRPDIVTLTTVLPTC-GRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV-KPDEITFVGLLQACSHS 481 HSP 2 Score: 95.9005 bits (237), Expect = 3.047e-19 Identity = 63/212 (29.72%), Postives = 107/212 (50.47%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKS-IFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 K++H D ++ S L+ YSK S+ A+ VFD++ + +NA++ YS + D L +FS + + + TIT VL A T + D + +H ++ G S + + N LI Y + + A ++F+ M RD+ +WNS++ + G ++ ALF ML S + RPD VT+ +VL CG+ + + G E+H Sbjct: 180 KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE---EGVGVSRHTITSVLSAFT-VSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI-RPDIVTLTTVLPTCGRLASLRQGREIH 386 HSP 3 Score: 87.0409 bits (214), Expect = 1.416e-16 Identity = 62/218 (28.44%), Postives = 110/218 (50.46%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLA-SKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNR-DIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGV-----TVVSVLHACGQSSDIVFGMEVH 849 +Q+H ++ D+ A + L+N Y+K + +A VF + + +F YNA++ + V+ D + + + ++ + PD +T +LK + + K+VH + G DS ++ +GL+T YS+ V A+ +FD + +R D V WN+++ GYSQ +E+ +F +M R +GV T+ SVL A S DI G +H Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRAN---GILPDKYTFPSLLKGSDAM--ELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKM------REEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 57/210 (27.14%), Postives = 111/210 (52.86%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 QLH ++ ++ +A+ LINFYSKS +R F+ KS ++++++ ++ +++ +L + + +L+PD+ + K+ L R + VH ++ G D+ +F+ + L+ Y++C ++ AR +FD M R++V+W+ M+ GY+Q G EE LF+E L L + + SV+ C S+ + G ++H Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG---NLRPDDHVLPSATKSCAILSRCD-IGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN-LAVNDYSFSSVISVCANSTLLELGRQIH 240 HSP 2 Score: 80.4925 bits (197), Expect = 1.325e-14 Identity = 43/187 (22.99%), Postives = 100/187 (53.48%), Query Frame = 1 Query: 259 DNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 D F+ S L++ Y+K ++ AR +FD++ +++ +++ M+ Y+ + L LF + ++L ++++ + V+ +++H ++ DSS F+ + L++ YS+C A +F+ + +++ WN+M+ Y+Q ++ LF+ M S ++P+ +T ++VL+AC + Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE---ALFENLAVNDYSFSSVISVCANSTL-LELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKPNFITFLNVLNACSHA 331
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP414_ARATH (Pentatricopeptide repeat-containing protein At5g42450, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E102 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 70/256 (27.34%), Postives = 120/256 (46.88%), Query Frame = 1 Query: 166 YGRLIQHFTDYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLF-----------SSLASSYSQDLK------------------PDNFTITCVLKALTGLFRDSRFAKEVHSYVLR-CGLDSSLFLVNGLITFYSRCDDVASARALFDGMSN--RDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFG 837 +G +I T R + KQLH + +A + F+ S ++N Y K ++L AR FD ++ S ++ Y + + L LF +++ +SQ + P+ T C + A++ + K +H+ ++ G ++F+ N LI+FYS+C ++ + F+ + R+IVSWNSMI GY+ G EE A+F +M+ LRP+ VT++ VL AC + I G Sbjct: 96 FGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGA-GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEG 350
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP329_ARATH (Pentatricopeptide repeat-containing protein At4g20770 OS=Arabidopsis thaliana GN=PCMP-E35 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 61/220 (27.73%), Postives = 107/220 (48.64%), Query Frame = 1 Query: 193 DYRLPRQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNR-DIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 +YR + + L R+ P+ ++ +S + R +F I S+ ++NAML YS ++ Y + + F + Q+LKPD T++ +L + L R K++H V+R + + +V+GLI YS C+ + + +FD N DI WNSMI+G+ + LFR M + VL P+ + +VL +C + ++ G + H Sbjct: 328 EYRSDKSVEFL-TRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQF---QNLKPDKTTLSVILSSCARL-RFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFH 542 HSP 2 Score: 97.0561 bits (240), Expect = 1.368e-19 Identity = 63/211 (29.86%), Postives = 107/211 (50.71%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDK-ITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 KQ+H +I ++ ++ + S LI YS+ + + +FD I I +N+M+ + + + T L LF + + L P+ + VL + + L ++ H V++ G S F+ L Y +C ++ SAR FD + ++ V WN MI GY G +E L+R+M++S +PDG+T VSVL AC S + G+E+ Sbjct: 436 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV--LCPNETSFATVLSSCSRLC-SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGLVETGLEI 642
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20 Identity = 68/214 (31.78%), Postives = 106/214 (49.53%), Query Frame = 1 Query: 208 RQAKQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 R QLHA + A D + + ++ Y+K +++ A+ +FD + + SYNAM+ YS + L LF L SS L D +++ V +A L + +++ ++ L + + N I Y +C +A A +FD M RD VSWN++IA + Q G E LF ML S + PD T S+L AC S + +GME+H Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSS---GLGFDEISLSGVFRACA-LVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI-EPDEFTFGSILKACTGGS-LGYGMEIH 505 HSP 2 Score: 97.4413 bits (241), Expect = 1.047e-19 Identity = 60/228 (26.32%), Postives = 112/228 (49.12%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHV----------------FDKITSKSI----FSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGME 843 ++H+ ++ +A ++ + LI+ YSK + +A + +K+ +K + S+N+++ Y + + D LF+ + + PD FT VL L + K++H+ V++ L S +++ + L+ YS+C D+ +R +F+ RD V+WN+MI GY+ G EE LF M+ + +P+ VT +S+L AC I G+E Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME---MGITPDKFTYATVLDTCANL-ASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENI-KPNHVTFISILRACAHMGLIDKGLE 725 HSP 3 Score: 92.4337 bits (228), Expect = 3.369e-18 Identity = 65/230 (28.26%), Postives = 111/230 (48.26%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARAL----------------FDGMSNRDI----VSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q++ I S++ D +A+ I+ Y K +L +A VFD++ + S+NA++ A+ + +TL LF S+ S ++PD FT +LKA TG + E+HS +++ G+ S+ + LI YS+C + A + + M N+ + VSWNS+I+GY E+ + LF M+ + PD T +VL C + G ++H Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR---IEPDEFTFGSILKACTG--GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI-TPDKFTYATVLDTCANLASAGLGKQIH 626 HSP 4 Score: 82.0333 bits (201), Expect = 4.554e-15 Identity = 60/241 (24.90%), Postives = 109/241 (45.23%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSV-HDMYTDT----------LRLFSSLASSYSQD-----------------LKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREM--LNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQ HA +I P F+ + L+ Y+ S + A VFDK+ + + S+N M+ YS +DM+ + ++S+ S Y Q+ ++ D T +LK + L D+ ++H V+R G D+ + + L+ Y++ + +F G+ ++ VSW+++IAG Q F+EM +N+ V + SVL +C S++ G ++H Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFL-EDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQS---IYASVLRSCAALSELRLGGQLH 304
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.756e-20 Identity = 66/207 (31.88%), Postives = 107/207 (51.69%), Query Frame = 1 Query: 229 ARLIFHSVAPDN-FLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEV 846 AR F ++ N F+++ +++ YSK L A+ +FD+ K + + M+ AY D + LR+F + S +KPD ++ V+ A L + AK VHS + GL+S L + N LI Y++C + + R +F+ M R++VSW+SMI S G + +LF M V P+ VT V VL+ C S + G ++ Sbjct: 266 AREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS---GIKPDVVSMFSVISACANLGILDK-AKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV-EPNEVTFVGVLYGCSHSGLVEEGKKI 467 HSP 2 Score: 73.9442 bits (180), Expect = 1.240e-12 Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 1 Query: 217 KQLHARLIFHSVAPDNFLASKLINFYSKSNS--LIQARHVFDKITSK-SIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALT---GLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQLHA ++ + ++ L S L N S+S L A +VF I S +N L S T+ + + + D F+ +LKA++ LF E+H + F+ G + Y+ C + AR +FD MS+RD+V+WN+MI Y + G +E LF EM +S V+ PD + + +++ ACG++ ++ + ++ Sbjct: 29 KQLHAHILRTVI--NHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGG---RLDQFSFLPILKAVSKVSALFE----GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM-PDEMILCNIVSACGRTGNMRYNRAIY 235
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20 Identity = 62/211 (29.38%), Postives = 105/211 (49.76%), Query Frame = 1 Query: 220 QLHARLIFHSVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCG-LDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q HA ++ + D F+ + LI+ YS S A +FD K + ++ AM+ + + ++ + F + + + + T+ VLKA G D RF + VH L G + +F+ + L+ Y +C A+ +FD M +R++V+W ++IAGY Q +++ +F EML S V P+ T+ SVL AC + G VH Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKT---GVAANEMTVVSVLKA-AGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV-APNEKTLSSVLSACAHVGALHRGRRVH 329 HSP 2 Score: 80.1073 bits (196), Expect = 1.730e-14 Identity = 63/214 (29.44%), Postives = 104/214 (48.60%), Query Frame = 1 Query: 217 KQLHARLIFHSV---APDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 KQ+H L+ + D FL+ L + + AR + ++ + SI +++++ +S L F + + P T +LKA+ L + F + H+++++ GLDS F+ N LI+ YS A LFDG ++D+V+W +MI G+ + G E F EM + V + +TVVSVL A G+ D+ FG VH Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLS-FLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPF--QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANE-MTVVSVLKAAGKVEDVRFGRSVH 227
BLAST of FC918250 vs. ExPASy Swiss-Prot
Match: PP441_ARATH (Pentatricopeptide repeat-containing protein At5g61800 OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20 Identity = 57/180 (31.67%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 280 LINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFRDSRFAKEVHSYVLRCGLDSSLFLVNGLITFYSRCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQS 819 LI+ K+ +++AR +FD + + + S+N+++ Y+ + + ++LF + + LKPDN I L A D + K +H Y R L FL GL+ FY++C + +A +F+ S++ + +WN+MI G + G E FR+M++S + +PDGVT +SVL C S Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVAL---GLKPDNVAIVSTLSACAQS-GDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGI-KPDGVTFISVLVGCSHS 363 HSP 2 Score: 89.7373 bits (221), Expect = 2.184e-17 Identity = 76/259 (29.34%), Postives = 114/259 (44.02%), Query Frame = 1 Query: 181 QHFTDYRLPRQAKQ--LHARLIFH--SVAPDNFLASKLINFYSKSNSLIQARHVFDKITSKSIFSYNAMLIAYSVHDMYTDTLRLFSSLASSYSQDLKPDNFTITCVLKALTGLFR-DSRFAKEVHSYVLRCGLDSSLFLVNGLITFYS-------------------------------RCDDVASARALFDGMSNRDIVSWNSMIAGYSQGGFYEECKALFREMLNSPVLRPDGVTVVSVLHACGQSSDIVFGMEVH 849 Q T R+ KQ + A ++F S++P + +++++ A VF IT+ S F +N ++ ++H+ + + + F + + PD T V KA D K +H LR GL S LF +N LI YS + ++ AR LFD M RD+VSWNS+I+GY+Q E LF EM+ + L+PD V +VS L AC QS D G +H Sbjct: 26 QFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSY---------ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRF--FVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV-ALGLKPDNVAIVSTLSACAQSGDWQKGKAIH 272 The following BLAST results are available for this feature:
BLAST of FC918250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >FC918250 ID=FC918250; Name=FC918250; organism=Citrus clementina; type=EST; length=849bpback to top |