FC919299

Overview
NameFC919299
Unique NameFC919299
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length2452
Libraries
Library NameType
PCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC919299_ssr41 microsatellite FC919299_ssr41:41..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10441 contig Ccv1_Contig10441:19..2470. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_BACAH (Histidine ammonia-lyase OS=Bacillus thuringiensis (strain Al Hakam) GN=hutH PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.280e-48
Identity = 141/494 (28.54%), Postives = 238/494 (48.18%), Query Frame = 1
Query:  295 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGG--ALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 1770
            ++ L G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ +    A    G    EL+ KEGLAL+NGT   +    +   EA   +  +E+++++  E +QG  +  D   HK + +  Q+E A+ +  IL  S       +L          QD Y+LR  PQ  G   +++ +  + +E E+N+  DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +  ++ + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:    1 MITLTGHTLTIEEMKRLLLEGEGVTACPNSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATSYQAELIASMTIEGLQGIIDAFDENVHKTRGYKEQVEVASRIRDILHDSKLTTKQGELRV--------QDAYSLRCIPQVHGASWQVLNYVKEKLEIEMNAATDNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNVRRVLSVEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_ALKMQ (Histidine ammonia-lyase OS=Alkaliphilus metalliredigens (strain QYMF) GN=hutH PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 4.280e-48
Identity = 131/466 (28.11%), Postives = 228/466 (48.93%), Query Frame = 1
Query:  298 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGGALQKELIKFLNAG-IFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAID 1692
            V++ G  LT+ ++  +A    ++ +   A   V  +   V   + +    YG+TTGFG  S        A+ K+  + L    I  +       L     R  +L+R N L +GYSG+R   L+ +  +LN  + P +P +G++ +SGDL PL+++  ++ G   +   G     +  +EA + AG     L  KEGLAL+NGT V + + ++++++   L  L++I  A+  E  +G  +  DH  H+++ H GQ + A  + +++ GS+ +    ++          QD Y LR  PQ  G   + I +A   +  EIN   DNPLI    ++ + GGNF G P+ ++ D   +AIA +  +   +   LVN    +GLP+ L+      L+ GF   + A AS  SE + LA+P +     +  + +D  S+G I++RK     +    +    L+A  QA++
Sbjct:    4 VSINGNDLTLEEMIMVAREYCSITIEPEAMVRVANTRKVVERYVEEERVVYGITTGFGKFSDV------AISKDQTEMLQRNLIISHACGVGEPLKEEVVRGVLLLRANALAKGYSGVRPNTLETLINMLNKGVHPIIPEKGSLGSSGDLAPLAHMVLVMMGEGEATYKGNK---MSGKEAMEKAGIPPVVLSAKEGLALINGTQVMTAIGALLIYDCQKLIKLADIAGALTLEAQRGIIDAFDHKVHRVRPHQGQQQTAQNIVNLVAGSTLITRQGEVR--------VQDAYTLRCIPQIHGASRDAIMYAVDKVNIEINGATDNPLIFPEEDEVISGGNFHGQPMALTFDFLGIAIAELANVSERRIERLVNP-QLSGLPAFLTA--KGGLNSGFMITQYAAASLVSENKILAHPASVDSIPSSANQEDHVSMGTIAARKARSIYENTVNVLGVELMAASQAVE 449          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_BACWK (Histidine ammonia-lyase OS=Bacillus weihenstephanensis (strain KBAB4) GN=hutH PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.590e-48
Identity = 143/494 (28.95%), Postives = 237/494 (47.98%), Query Frame = 1
Query:  295 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGG--ALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 1770
            ++ L G TLTV ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ +    A    G    EL+ KEGLAL+NGT   +    +   EA   A  SE+++++  E ++G  +  D   HK + +  Q+E A+ +  IL  S  V    +L          QD Y+LR  PQ  G   +++ +  + +E E+N+  DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +   + + +  ++   QA + R + EN+    K    Q  ++V ++
Sbjct:    1 MITLTGHTLTVEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEASAYQSELIASMTMEGLRGIIDAFDENVHKARGYKEQVEVASRIRDILHDSKLVTKQGELRV--------QDAYSLRCIPQVHGASWQVLNYVKEKLEIEMNAATDNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNARRVLAIEMICAMQAAEYRGI-ENMSTVTKTFYHQGRQQVPSI 472          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_PSEPF (Histidine ammonia-lyase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hutH PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.301e-48
Identity = 141/470 (30.00%), Postives = 239/470 (50.85%), Query Frame = 1
Query:  298 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRH 1701
            +NL    L++AQ+  +  +   + L  SA   ++AS   V + + +   +YG+ TGFG  A++   +++   LQ+ L+    AG+          +     R  M+++VN+L +G+SGIR  ++ A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     G+ +D  EA K AG     L  KEGLAL+NGT V +  A   LFE  +L   +  L  +  E + G     D   H  +   GQI+AAA    +L   S V+ + +  E        QD Y+LR  PQ +G  +   R A + +  E N+V+DNPL+  +    + GGNF   P+ ++ DN  LAIA IG L   + S L+ D + + LP  L    N  ++ GF  A++  A+  SE + L++P +        + +D  S+   + ++  E  +  + + +   +A  Q +DLR+
Sbjct:    4 LNLIPGQLSLAQLRDVYQNPVKLTLDNSASAQIEASVACVEQILAENRTAYGINTGFGLLASTRIASEDLENLQRSLVLSHAAGV-------GQPISDELVRLIMVLKVNSLSRGFSGIRRVVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGEGKARH---KGEWMDATEALKVAGLTPLTLAAKEGLALLNGTQVSTAFALRGLFEGEDLFAGALALGGLTVEAVLGSRSPFDARIHAARGQKGQIDAAAAYRDLLGERSEVSDSHQNCE------KVQDPYSLRCQPQVMGACLTQFRQAAEVLAIEANAVSDNPLVFAAEGDVISGGNFHAEPVAMAADNMALAIAEIGSLSERRIS-LMMDKHMSQLPPFLVA--NGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGKRLWEMAENTRGILAVEWLAAVQGLDLRN 454          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_BACC2 (Histidine ammonia-lyase OS=Bacillus cereus (strain G9842) GN=hutH PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 9.535e-48
Identity = 141/494 (28.54%), Postives = 237/494 (47.98%), Query Frame = 1
Query:  295 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRTTKNGG--ALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTV 1770
            ++ L G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ +    A    G    EL+ KEGLAL+NGT   +    +   EA   A  +E+++++  E +QG  +  D   HK + +  Q++ A+ +  IL  S       +L          QD Y+LR  PQ  G   +++ +  + +E E+N+  DNPLI     K + GGNF G PI  +MD  ++ +A +  +   +   LVN   N+ LP  LS    P L  G    + A AS  SE + LA+P +     +  + +D  S+G I+SR   + +   + + S  ++   QA + R + EN+    K+   Q  ++V ++
Sbjct:    1 MITLTGHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVEDGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALVLLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGTQAMTAQGVLSYIEAEATAYQAELIASMTIEGLQGIIDAFDENVHKARGYKEQVDVASRIRDILHDSKLTTKQGELRV--------QDAYSLRCIPQVHGASWQVLNYVKEKLEIEMNAATDNPLIFDGGEKVISGGNFHGQPIAFAMDFLKVGMAELANISERRIERLVNPQLND-LPPFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSIPSSANQEDHVSMGTIASRHAHQIIQNARRVLSIEMICAMQAAEYRGI-ENMSTVTKSFYHQGRQQVPSI 472          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_STRCO (Histidine ammonia-lyase OS=Streptomyces coelicolor GN=hutH PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.124e-47
Identity = 156/512 (30.47%), Postives = 242/512 (47.27%), Query Frame = 1
Query:  298 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGA--TSHRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKA 1827
            V +G   +T + V A+A +   +ELSE A   + A+   V     K    YGV+TGFGA  T H + +  G LQ+ +++   AG+          +     RA M +R+ T+  G +G+R E+ + +  +LN  ITP +   G++  SGDL PLS+ A  L G  +  A GP+G +    E     G    EL+ KEGLAL+NGT    G+  M L + + L   ++I +A+  E + G         H ++ HPGQ  +AA M  +L GS         H  D   +  QD Y++R +PQ  G   + +  A    ERE+ +  DNP++ +   +    GNF G P+   +D   +A+A +G +   +   L++   ++GLP  L+   +  +D G   A+   A+   EL+ LA P +     +    +D  S+G  ++RK   AVD L  + +  L A  +AI LR   E L  T       V + V   G  G   P R    DL  A
Sbjct:    4 VVVGTSGVTASDVLAVARAGARIELSEEAVAALAAARSVVDALAAKPDPVYGVSTGFGALATRHISPELRGRLQRNIVRSHAAGM-------GPRVEREVVRALMFLRLKTVCSGRTGVRPEVAQTMADVLNAGITPVVHEYGSLGCSGDLAPLSHCALTLMGEGD--AEGPDGTVRPAGELLAAHGIAPVELREKEGLALLNGTDGMLGMLVMALADLDTLYKSADITAALTMEALLGTDRVLAPELHAIRPHPGQAASAANMAAVLKGSGLTG-----HHQDDAPR-VQDAYSVRCAPQVAGAGRDTMAHAGLVAERELAAAVDNPVV-LPDGRVESNGNFHGAPVAYVLDFLAVAVADLGSIAERRTDRLLDKNRSHGLPPFLAD--DAGVDSGLMIAQYTQAALVGELKRLAVPASADSIPSSAMQEDHVSMGWSAARKLRTAVDNLARVIAVELYAATRAIQLR---EGL--TPAPASQAVVEAVRAAGVEGP-GPDRHLAPDLAAA 491          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_STAAB (Histidine ammonia-lyase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=hutH PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.124e-47
Identity = 138/472 (29.24%), Postives = 224/472 (47.46%), Query Frame = 1
Query:  304 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATS--HRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLI--DVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLE 1707
            L GETLT+  + +     + VE+ + A E VK S   V   +      YG+TTGFG  S           LQ  LI+    G+                   M++R+NTLL+G+SG   E+++ +   +N  I P +P +G++ ASGDL PLS++A  L G          G+  D  +  +        LQ KEGLAL+NGT   +    +   EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   ++  +  + +E E+N+ NDNPLI  +V+    + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS    P L  G    + A AS  SE + LA+P +    ++  + +D  S+G  ++R   + ++  + + +   V   QA +L+ +E
Sbjct:    5 LDGETLTIEDIKSFLQQQSKVEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGK---VLHRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQAEIR--------VQDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEVNETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSMGTTAARHGYQIIENTRRVLAIECVIALQATELKGVE 456          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_RHOSK (Histidine ammonia-lyase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=hutH PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.124e-47
Identity = 136/461 (29.50%), Postives = 227/461 (49.24%), Query Frame = 1
Query:  322 TVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 1698
            T+AQ+ AI        L+  AR  V+A++  V  +       YGV TGFG  A+      +   LQ+ LI     G+          +P S  R  M +++ +L +G SG+R++I+  +  +L   +TP +P +G++ ASGDL PL+++A ++ G   ++     G+ +    A   AG     L PKEGLAL+NGT   +  A   LFE    A  + ++SA+  + + G         H L+ H GQIEAAA M  +L+GS+   + +   E D   +  QD Y +R  PQ  G  ++++R A  ++  E N+  DNPL+ +S  + + GGNF   P+G + D   LA++ IG +   + + +V+   +  LP  L+    P L+ G   AE+  A+  SE + +A P          + +D  S+    +R+    V+ L ++  T  +   Q ++ R
Sbjct:   10 TLAQLEAIWREGRRARLAPEARPAVEAAAARVAAAAAGTAPVYGVNTGFGKLASLKIAPADTAQLQRNLILSHCCGV-------GEPMPPSTARLMMALKLLSLGRGASGVRWKIVALLEGMLAAGVTPVIPAQGSVGASGDLAPLAHMAAVMIGEGEAEV---GGRRLPGAAALAHAGLAPVALGPKEGLALINGTQFSTAYALAGLFEGWRAAQAALVISALSTDAIMGSTAPLRPEIHALRGHAGQIEAAATMRALLEGSA---IRESHREGD---QRVQDPYCIRCQPQVTGAAMDVLRMAAGTLATEANAATDNPLV-LSDGRIVSGGNFHAEPVGFAADMIALALSEIGAIAQRRVALMVDPTLSFDLPPFLT--PEPGLNSGLMIAEVTTAALMSENKHMAAPTVTDSTPTSANQEDHVSMAAHGARRLGRMVENLAVILGTEAICAAQGVEFR 451          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_AGRT5 (Histidine ammonia-lyase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=hutH PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.623e-47
Identity = 137/469 (29.21%), Postives = 231/469 (49.25%), Query Frame = 1
Query:  298 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLR 1698
            + L    +T+A +AAI   +   +L  S   G++ ++  + E        YG+ TGFG  A+      +   LQ+ LI     G+          LP +  R  M +++ +L +G SG+R E+++ I  +L   + P +P +G++ ASGDL PL+++A ++ G   +      G  +   EA   AG     L  KEGLAL+NGT   + LA   LF A+  A  + I  A+  +   G         H L+ H GQI+A A + ++L+GS       ++  I+  ++  QD Y +R  PQ  G  ++++R   +++E E N+V DNPL+ +S N  + GGNF   P+  + D T LAI  IG +   + + LV+   + GLP+ LS  + P L+ G   AE+  A+  SE + +A+P +        + +D  S+    +R+     D L  +     ++  Q ++LR
Sbjct:    6 ITLHPGAVTLADLAAIYWENGTAKLDRSFDAGIEKAAARIAEIAAGNAPVYGINTGFGKLASIKIDAADVATLQRNLILSHCCGV-------GVPLPENVVRLIMALKLVSLGRGASGVRLELVRLIEAMLEKGVIPVIPEKGSVGASGDLAPLAHMAAVMMGEGEAFY---EGAPLPAGEALAKAGLTPVVLAAKEGLALINGTQTSTALALAGLFRAHRAAQAALITGALSTDAAMGSSAPFHPDIHSLRGHKGQIDAGAALRNLLEGSEI-----RVSHIEGDER-VQDPYCIRCQPQVDGACLDLLRQVARTLEIEANAVTDNPLV-LSDNSVVSGGNFHAEPVAFAADQTALAICEIGAIAQRRVALLVDPALSYGLPAFLS--KKPGLNSGLMIAEVTSAALMSENKQMAHPASVDSTPTSANQEDHVSMACHGARRLLPMTDNLFAILGIEALSAVQGVELR 455          
BLAST of FC919299 vs. ExPASy Swiss-Prot
Match: HUTH_STAAT (Histidine ammonia-lyase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=hutH PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 4.732e-47
Identity = 137/472 (29.03%), Postives = 223/472 (47.25%), Query Frame = 1
Query:  304 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATS--HRTTKNGGALQKELIKFLNAGIFGNGTKSSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILKAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGQIIDPQEASKPAGFGFFELQPKEGLALVNGTAVGSGLASMVLFEANNLALLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVNVAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEMIRFATKSIEREINSVNDNPLIDVSRNK--ALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVHSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLE 1707
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S           LQ  LI+    G+                   M++R+NTLL+G+SG   E+++ +   +N  I P +P +G++ ASGDL PLS++A  L G          G+  D  +  +        LQ KEGLAL+NGT   +    +   EA +L   SE ++A+  + + G  +   H  H +++   QI  AA M   L+GS+      ++          QD Y LR  PQ  G   ++  +  + +E E+N+ NDNPLI    N+   + GGNF G PI  ++D+ +L ++ +  +   +   LVN   N  LP+ LS    P L  G    + A AS  SE + LA+P +    ++  + +D  S+G  ++R   + ++  + + +   V   QA +L+ +E
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDVHAVRNFQEQINVAARMRDWLEGSTLTTRQSEIR--------VQDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEANETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLS--PEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSMGTTAARHGYQIIENARRVLAIECVIALQAAELKGVE 456          
The following BLAST results are available for this feature:
BLAST of FC919299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 253
Match NameE-valueIdentityDescription
HUTH_BACAH4.280e-4828.54Histidine ammonia-lyase OS=Bacillus thuringiensis ... [more]
HUTH_ALKMQ4.280e-4828.11Histidine ammonia-lyase OS=Alkaliphilus metallired... [more]
HUTH_BACWK5.590e-4828.95Histidine ammonia-lyase OS=Bacillus weihenstephane... [more]
HUTH_PSEPF7.301e-4830.00Histidine ammonia-lyase OS=Pseudomonas fluorescens... [more]
HUTH_BACC29.535e-4828.54Histidine ammonia-lyase OS=Bacillus cereus (strain... [more]
HUTH_STRCO2.124e-4730.47Histidine ammonia-lyase OS=Streptomyces coelicolor... [more]
HUTH_STAAB2.124e-4729.24Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_RHOSK2.124e-4729.50Histidine ammonia-lyase OS=Rhodobacter sphaeroides... [more]
HUTH_AGRT53.623e-4729.21Histidine ammonia-lyase OS=Agrobacterium tumefacie... [more]
HUTH_STAAT4.732e-4729.03Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC06055A01T7 PCR Citrus clementina cDNA clone C06055A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC919299 ID=FC919299; Name=FC919299; organism=Citrus clementina; type=EST; length=2452bp
AATTTCCTTTAGCTCATTCATTCTTCATCACTCCCATTCATTCTTCTTCT
TCTTCTTCTTCTTTCTACAGTTTTGGTATTTTTTGTAATTGCAGTAACAT
TTACGTAAAACGATATGGAGATAGGTGCCACTACTGAGAATGGTCACCAG
AACGGTGGCCTGGAGGGTTTGTGCAAGAATAACAATTACAATTACAGTTC
TGGGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAAGGGAGCC
ATTTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTC
AACCTCGGTGGTGAGACGTTGACCGTAGCACAAGTGGCTGCCATTGCCAC
GTCCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGG
CCAGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTAC
GGCGTTACCACTGGCTTTGGTGCCACTTCTCATCGGACAACCAAGAACGG
CGGTGCTCTTCAAAAGGAGCTCATTAAATTTTTGAACGCTGGAATCTTTG
GAAACGGAACAAAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCA
GCCATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCG
ATTTGAAATCCTGAAAGCGATCACAAAGCTGCTCAATCACAACATCACTC
CATGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCT
CTTTCCTACATTGCCGGACTGCTCACCGGCCGGCCCAATTCTAAGGCCAC
CGGGCCCAATGGACAGATCATTGATCCCCAGGAAGCCTCTAAACCAGCGG
GTTTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTGTCAAT
GGCACTGCTGTTGGTTCTGGCCTGGCTTCTATGGTTCTGTTTGAGGCTAA
CAACCTTGCTCTGTTATCAGAAATTTTGTCAGCTATTTTTGCTGAAGTCA
TGCAAGGCAAACCTGAGTTCACCGATCACTTGACACACAAATTGAAGCAC
CATCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACATATCCTCGATGG
CAGCTCTTATGTTAACGTGGCTAAGAAGTTGCATGAGATTGATCCTCTGC
AGAAGCCGAAACAGGATCGTTATGCCCTGAGAACTTCACCACAATGGCTC
GGCCCTCAGATCGAAATGATTCGGTTTGCAACCAAGTCTATTGAACGGGA
GATCAACTCGGTGAATGACAATCCCCTGATCGACGTTTCAAGGAACAAGG
CCTTACATGGTGGCAATTTTCAGGGGACCCCAATTGGTGTCTCAATGGAC
AATACCCGTTTGGCTATTGCGGCAATAGGGAAGCTCATGTTTGCCCAATT
TTCTGAACTTGTCAACGATTTTTACAACAATGGATTGCCGTCAAATCTGT
CTGGTGGCAGGAATCCCAGCCTGGATTATGGTTTCAAGGGCGCTGAAATT
GCTATGGCTTCCTATTGTTCGGAGCTCCAATTTCTTGCCAATCCTGTTAC
TAACCACGTCCATAGTGCTGAACAGCACAACCAAGATGTAAACTCCTTGG
GATTGATCTCTTCCAGGAAGACTGCTGAAGCAGTCGACATCCTGAAGCTC
ATGTCTTCCACATTCTTGGTAGCGCTTTGCCAGGCTATTGATTTGAGACA
TTTGGAGGAAAATTTGAAGCACACAGTCAAGAATACTGTCAGCCAAGTAG
CTAAGAAAGTCTTAACCGTCGGTGCTAGTGGAGAGCTTCATCCATCAAGA
TTCTGTGAGAAGGATCTGCTCAAAGCGGCTGATCGCGAACACGTCTTTGC
ATACATTGATGACCCCTGCAGTGCTACCTATCCATTGATGCAAAAGCTAA
GGCAAGTACTTGTTGAGCACGCACTGAACAATGGAGAGAACGAGAAGACT
GCCAACTCTTCAATCTTCCAGAAGATTGCAGCCTTTGAGGAGGAATTGAA
AACCGTTTTGCCGAAAGAAGTTGAGAATGCCAGGCAGACTGTTGAGAATG
GAAGTCCAACAATTCCCAACAGGATCAAAGAATGCAGGTCTTACCCGTTG
TACAGGTTAGTGAGGGAGGGGCTCGGGTCTAATTTTCTAACAGGGGAAAA
AGTTACATCGCCCGGCGAGGAATTTGACAAAGTTTTTACAGCAATGTGCC
AGGGCAAGATCATTGATCCAATGCTGGAATGTCTCAGGGAATGGAATGGC
GCCCCTCTTCCAATTTGTTAGTTGTTTTTATTTTGTTTAATAACATGGTC
TTCAATCCCTTGTGTTCTTGTGTTCATAGAATTTGCCCATGCGAGTCAGT
GGTACAAATCCATCTGTAATATTTCAATCACTTCTATTGGTTTTTTCATA
TAAGGTTATAAGACTTATTGTCCTTTATTTTAAAAAAAAAAAAAAAAAAA
AA
back to top