FC919304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.097e-26 Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CG+ IPYKISPSTDC+ V+ Sbjct: 27 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.097e-26 Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CG+ IPYKISPSTDC+ V+ Sbjct: 23 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.432e-26 Identity = 55/92 (59.78%), Postives = 67/92 (72.83%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 A+TCGQV++++ PC+ + R G P CCSGVRSLN AARTT DR+AACNCLK A IRG+ AA +P +CG+ IPY IS STDCSRV Sbjct: 30 AVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.432e-26 Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 100 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 P A+TCGQVTA LAPC+P+L+ GR P CC GV++L G+A+TT DR+ AC CLK A I+GI N AAG+P C + IPYKISPSTDCS V+ Sbjct: 20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.871e-26 Identity = 57/97 (58.76%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 100 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 P A+TCGQVTA LAPC+P+L+ GR P CC GV+ L G+A+TT DR+ AC CLK A I+GI N AAG+P C + IPYKISPSTDCS V+ Sbjct: 20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.191e-26 Identity = 55/92 (59.78%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AI+CGQV +++APCI + R G P CCSGVRSLN AARTT DR+AACNCLK A + G+ AA +P +CG+ IPY IS STDCSRV Sbjct: 28 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.167e-26 Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 AI+CG V+ +L PC+ +L+ GG P P CC GV+ LNGAARTT DR+AACNCLK + G+I G+KP A LP +CG+R+PY IS ST+C+ +R Sbjct: 26 AISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.108e-26 Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CG+ IPYKIS ST+C+ V+ Sbjct: 18 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25 Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CG+ IPYKIS ST+C+ V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.584e-25 Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CG+ IPYKIS +T+C+ V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTVK 117 The following BLAST results are available for this feature:
BLAST of FC919304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919304 ID=FC919304; Name=FC919304; organism=Citrus clementina; type=EST; length=607bpback to top |