FC919304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.036e-21 Identity = 50/99 (50.51%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 100 PVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 P+T+ A++CG V+ +APCI +L P CCSGV SLN ARTTPDRQ AC CL A + I AAGLP CG+ IPYKIS +T+C+ V+ Sbjct: 20 PITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.534e-20 Identity = 50/94 (53.19%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 AI+ QV +SL PC+ ++R P PP C G+RSL AAR DRQAAC C+K I I VAAGLP QC + IPYKISPS DC RV+ Sbjct: 27 AISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINYGVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.534e-20 Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 115 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 ++CG V +A CI +LR G P CC+GV++L +A TT DR+ AC CL A TI G+ +AAGLP +CG+ IPYKISPST+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAA-CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP2_BRANA (Non-specific lipid-transfer protein 2 OS=Brassica napus GN=LTP2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.003e-20 Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1 Query: 100 PVTN--AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 P+T+ A++CG V+ +APCI +L G P CC+GV +LN ARTTPDRQ AC CL A + + AAGLP CG+ IPYKIS ST+C+ VR Sbjct: 20 PITSNAALSCGTVSGYVAPCIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP3_BRANA (Non-specific lipid-transfer protein 3 OS=Brassica napus GN=LTP3 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.417e-20 Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 A++CG V+ +LA CI +L G P CCSGV SLN ARTTPDRQ AC CL A + I AAGLP CG+ IPYKIS +T+C+ V+ Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPVPTA-CCSGVTSLNNMARTTPDRQQACRCLVGAANALPTINVARAAGLPKACGVNIPYKISKTTNCNSVK 117
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.828e-20 Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AITCGQV+++L PC + + G P CCSGV+ L G AR+T D+QA C CLK G + AAG+P +CG+ +PY IS S DCS++ Sbjct: 26 AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAYNAGR---AAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPB_BRAOT (Non-specific lipid-transfer protein B OS=Brassica oleracea var. italica GN=WAX9B PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.612e-20 Identity = 48/93 (51.61%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + + AAGLP CG+ IPYKIS ST+C+ VR Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANSFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.941e-20 Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 100 PVT--NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV----AAGLPXQCGIRIPYKISPSTDCSRVR 390 P+T A+TCG V +++APCI ++ GG P CC+GV LN ARTTPDRQ AC CL+ A R + PN+ AAG+P CG+ +P+ IS +T+C+ V+ Sbjct: 20 PITANRALTCGTVNSNVAPCIGYITQGGTLPGA-CCTGVSKLNSMARTTPDRQQACRCLETA---ARALGPNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_BRANA (Non-specific lipid-transfer protein 1 OS=Brassica napus GN=LTP1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.941e-20 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 A++CG V+ +LA CI +L G P CC+GV +LN ARTTPDRQ AC CL A + AAGLP CG+ IPYKIS ST+C+ VR Sbjct: 26 ALSCGTVSGNLAACIGYLTQNGPLPRG-CCTGVTNLNNMARTTPDRQQACRCLVGAANAFPTLNAARAAGLPKACGVNIPYKISKSTNCNSVR 117
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.298e-19 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L QCG+R+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94 The following BLAST results are available for this feature:
BLAST of FC919304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919304 ID=FC919304; Name=FC919304; organism=Citrus clementina; type=EST; length=607bpback to top |