FC919304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.298e-19 Identity = 44/94 (46.81%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPP-CCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 A+TC VT +L PC+ +L+ G PPP CC+GVRSL AA+T DR+ ACNC+K A + + VAA L QCG+R+ Y +SP+ +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.444e-19 Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +P +CG+ + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.444e-19 Identity = 39/92 (42.39%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 A++CG VT+S+APC+ ++ P CCSGVR+LNG A ++ DR+ AC+CLK + R + AA +P +CG+ + + IS S DCS++ Sbjct: 29 AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.444e-19 Identity = 41/92 (44.57%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AITC VT +L PC+P+LR+GG+ P P CC+G + L GA RT DR+ AC C K A ++ ++P++A+ LP +CGI I+P+ +C+ + Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.436e-18 Identity = 44/96 (45.83%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 100 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 P + I CG VT++LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A I+G+ ++ A LP CG+ IPY IS ST+C + Sbjct: 21 PTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.198e-18 Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 A+ CGQV + + PC+ +++ GG P CC+GVR L+ A+++ DRQ CNCLK I + N AA +P +C + +PY ISP DCSR+ Sbjct: 26 ALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17 Identity = 43/92 (46.74%), Postives = 54/92 (58.70%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AI C QV LA C+P+L+ GG P P CC+G+ SL AA DRQ ACNCLK TI GI + A LP +CG+ I S + DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.031e-17 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 115 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 + CGQV +SLA CIPFL G P CC+GV++L A T+ DR+AAC C+K A IK + A+ LP +CG+ I IS +T+C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.029e-16 Identity = 40/92 (43.48%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 AI CG V + + PC+ +++ GG P CC GV++L+ AR+ DRQ+ACNCLK I + + A +P +CG+ +PY IS + DCSRV Sbjct: 23 AIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.344e-16 Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGG-RFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTI-RGIKPNVAAGLPXQCGIRIPY--KISPSTDCS 381 A++CG+V ++L PC +L GG P P CC+GVR LNG TT DR+ AC C+K A + G+ + AAG+P +CGI+IPY +I +T C+ Sbjct: 26 ALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119 The following BLAST results are available for this feature:
BLAST of FC919304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919304 ID=FC919304; Name=FC919304; organism=Citrus clementina; type=EST; length=607bpback to top |