FC919304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.993e-16 Identity = 48/100 (48.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 100 PVT-NAI-TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 P+T NA+ +CG V +LA CI +L G CC+GV +L A TTPDRQ AC CL+ A + G+ AAGLP C + IPYKIS ST+C+ VR Sbjct: 20 PITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.106e-16 Identity = 48/96 (50.00%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLK---RAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 AI+CG VT SL C +L GG F P CCSGV+ LN ARTT DRQ AC C++ RA G+ + AA LP C +RI Y IS T+C+ VR Sbjct: 26 AISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGS--RLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16 Identity = 38/95 (40.00%), Postives = 58/95 (61.05%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIR--GIKPNVAAGLPXQCGIRIPYKISPSTDCSRVR 390 AI+C V A+L PC+ ++ GG P CC+G+R L+ A + D+Q C C+K G + I AA LP +CG+++PYKI PST+C+ ++ Sbjct: 23 AISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.709e-16 Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 109 NAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 +AI+C V L PC+ +L +G PP CC GV+SL A T+ D++AAC C+K ++ +KP +A L CG +P SP+ DC+ V Sbjct: 24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.309e-15 Identity = 39/96 (40.62%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 112 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNV---AAGLPXQCGIRIPYKISPSTDCSRVR 390 A++C V A L PC+ ++ GG P CC+G+ +L A+T+ DRQ C C+K A G + + P A LP +CG+ +PYK SPSTDC ++ Sbjct: 20 AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLT-LSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.373e-15 Identity = 40/97 (41.24%), Postives = 53/97 (54.64%), Query Frame = 1 Query: 100 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIR-IPYKISPSTDCSRV 387 PV AI+C QV +++ PC +L P CC +R L+ + TPDRQA CNCLK G+K AA LP C + + ISP+ DCS+V Sbjct: 27 PVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLK-TQAKSYGVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.046e-13 Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = 1 Query: 115 ITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISPSTDCSRV 387 + CGQV +L+ C+PFL P CC+GV L A T D++ AC C+K A I+ + A+ LP +CG+ I IS +T+C + Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 32/98 (32.65%), Postives = 52/98 (53.06%), Query Frame = 1 Query: 100 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPY-KISPSTDCSRVR 390 P CG+V + PC+ F++ + P CCSG + L+ +TT ++ AC C+ RA I GIK + A +P +C I+ I+ DCS+++ Sbjct: 28 PAPGEEACGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGISGIKNELVAEVPKKCDIKTTLPPITADFDCSKIQ 125
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11 Identity = 33/90 (36.67%), Postives = 49/90 (54.44%), Query Frame = 1 Query: 118 TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISP---STDC 378 TCG V +L PC+PF++ + P CCSG + L+G +T P R AC C++ A T I + + +P CGI + K+ P + DC Sbjct: 39 TCGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGI-VDSKLPPIDVNMDC 127
BLAST of FC919304 vs. ExPASy Swiss-Prot
Match: NLT11_PARJU (Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica GN=PMAI PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 118 TCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPXQCGIRIPYKISP---STDCSRV 387 TCG + +L PC+PF++ + P CCSG + L+G +T P R AC C++ A T I + + +P CGI + K+ P + DC V Sbjct: 3 TCGTMVRALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGI-VDSKLPPIDVNMDCKTV 94 The following BLAST results are available for this feature:
BLAST of FC919304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919304 ID=FC919304; Name=FC919304; organism=Citrus clementina; type=EST; length=607bpback to top |