FC919310

Overview
NameFC919310
Unique NameFC919310
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
PCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig865 contig Ccv1_Contig865:163..667. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.158e-56
Identity = 99/159 (62.26%), Postives = 120/159 (75.47%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFE VNHGI  E MDTVE+LTK HY+KCMEQRFKE+VA++  E +Q+E++D+DWESTF++RHLP S+I+E+PDLD++YRKVM                          GYLKK F+G+ GP FGTKVSNYPPCPKP+LIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLECVQSEIDDLDWESTFFLRHLPVSSISEIPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.400e-56
Identity = 100/159 (62.89%), Postives = 115/159 (72.33%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E MDTVE+LTK HY+KCMEQRFKELVA +  EG++ EV DMDWESTF++RHLP S I+++PDLD+ YR+VM                           YLK  F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEGVEVEVTDMDWESTFFLRHLPSSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 7.505e-56
Identity = 98/159 (61.64%), Postives = 117/159 (73.58%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DAC+NWGFFELVNHGI  EF+D VE++T+ HY+KCME+RFKE V S+  E  Q EVNDMDWESTF++RHLP+S I+++ DLDEEY+K+M                          GYLKK F+G+ GPTFGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEAAQAEVNDMDWESTFFLRHLPESNISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.672e-55
Identity = 96/159 (60.38%), Postives = 119/159 (74.84%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHG+  E +DTVE++TK HY+K MEQRFKE+VA++  + +Q+E++D+DWESTF++RHLP S I+E+PDL+EEYRK M                          GYLKKVF+G+ GP FGTKVSNYPPCPKPDLIKGLRAH+DAGG +
Sbjct:   26 DACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEMVAAKGLDDVQSEIHDLDWESTFFLRHLPSSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.414e-54
Identity = 95/159 (59.75%), Postives = 116/159 (72.96%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNHGI  E +DTVE++ K HY+K MEQRFKE+VA++  E +Q+E++ +DWESTF++RHLP S I+E+PDL+E+YRK M                          GYLKK F+G+ GP FGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPSSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 7.767e-53
Identity = 92/159 (57.86%), Postives = 115/159 (72.33%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFE VNHGI  E +D VE++TK HY+KCME+RFKE + +R  + +++EVND+DWESTFY++HLP S I++VPDLD++YR +M                          GYLKKVF+G+  PTFGTKVSNYPPCP PDL+KGLRAHTDAGG +
Sbjct:   26 DACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISDVPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGII 184          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.240e-50
Identity = 90/159 (56.60%), Postives = 111/159 (69.81%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DAC NWGFF++VNH +  E MD VER+TK HY+K  EQ+FK++V ++     +++VND+DWESTFY+RH P S I+EVPDLD++YRK+M                           YLK  F+GANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGG +
Sbjct:   32 DACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGII 190          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.608e-50
Identity = 96/161 (59.63%), Postives = 110/161 (68.32%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANG--PTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFELVNH I  E MD VERLTK HY+KCMEQRFKEL+AS+  EG   + NDMDWESTF++RHLP S ++E+PDL +E+RKVM                          GYLK  F G     PTFGTKVSNYPPCP+P+L KGLRAHTDAGG +
Sbjct:   26 DACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMASKV-EGAVVDANDMDWESTFFIRHLPVSNLSEIPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLI 185          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.050e-49
Identity = 86/159 (54.09%), Postives = 109/159 (68.55%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQTEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFE+VNHG+  + MD  E++TK HY+  MEQ+F +++ S+  E ++ EV D+DWESTFY+RHLPQS + ++PD+ +EYR  M                          GYLKKVFHG  GPTFGTKVSNYP CPKP++IKGLRAHTDAGG +
Sbjct:   29 DACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLEREVEDVDWESTFYLRHLPQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGII 187          
BLAST of FC919310 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.017e-44
Identity = 84/162 (51.85%), Postives = 105/162 (64.81%), Query Frame = 1
Query:    1 DACENWGFFELVNHGIEPEFMDTVERLTKAHYRKCMEQRFKELVASRAPEGIQ--TEVNDMDWESTFYVRHLPQSTINEVPDLDEEYRKVMXXXXXXXXXXXXXXXXXXXXXXXXXXGYLKKVFHG-ANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGCL 477
            DACENWGFFE++NHGI  E MD VE++TK HY++  EQRF E  +    EG     +   +DWESTF+VRHLP+S I ++PDLD++YR++M                          GYL K F G A  PTFGTKVS+YPPCP+PDL+KGLRAHTDAGG +
Sbjct:   29 DACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDDVNKAEKLDWESTFFVRHLPESNIADIPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGII 190          
The following BLAST results are available for this feature:
BLAST of FC919310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ACCO_PEA1.158e-5662.261-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO2_SOLLC4.400e-5662.891-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_CUCME7.505e-5661.641-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO1_MALDO1.672e-5560.381-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
ACCO2_MALDO2.414e-5459.751-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_ARATH7.767e-5357.861-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO_DIACA1.240e-5056.60Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_PERAE3.608e-5059.631-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO1_BRAJU1.050e-4954.091-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_ORYSI1.017e-4451.851-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]

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Properties
Property NameValue
Genbank descriptionC06055A12T7 PCR Citrus clementina cDNA clone C06055A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC919310 ID=FC919310; Name=FC919310; organism=Citrus clementina; type=EST; length=505bp
GATGCTTGTGAAAACTGGGGCTTCTTTGAGCTGGTGAATCATGGAATTGA
GCCGGAGTTTATGGACACAGTGGAGAGATTGACCAAGGCGCATTACAGAA
AATGTATGGAGCAAAGATTCAAGGAGCTTGTTGCAAGCAGGGCACCTGAA
GGTATCCAAACCGAGGTCAATGACATGGACTGGGAAAGCACTTTCTATGT
GCGTCACCTCCCTCAGTCGACCATCAATGAAGTCCCAGATCTTGATGAGG
AATACAGGAAGGTGATGAAGGAATTTGCATTGAAATTGGAGAAATTAGCA
GAGGAGCTATTGGACTTGTTATGCGAGAATCTTGGATTAGAGAAGGGGTA
CTTGAAAAAGGTCTTTCACGGGGCAAACGGACCAACCTTTGGTACCAAAG
TTAGCAACTACCCACCATGCCCCAAGCCAGATTTGATCAAGGGTCTCCGG
GCACACACCGATGCCGGTGGATGCTTGTCAAAATTGGGCACACACCGATG
CCGGA
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