FC919314
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.583e-12 Identity = 45/109 (41.28%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ-DYVLLAARGKGRLAE 325 + EII K++ LFP + + + VVK +S+Y+ P +P RP Q++PVE F+LAG YTKQ Y+ SMEGA LSG+ + I LLA R K AE Sbjct: 468 NEEIIRRVSKQVLALFPSSQGLEVTWSS-----VVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAE 571
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.817e-12 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 256 + EII K++ +LFP + + + VVK +S+Y+ P +P RP Q++PV+ F+L+G YTKQ Y+ SMEGA LSG+ Sbjct: 453 NEEIISKVQKQVVELFPSSRGLEVTWSS-----VVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGR 532
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 1.021e-11 Identity = 39/113 (34.51%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAEASMCP 340 + +II+ ++ +LFP + + + VVK +S+Y+ P +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+ + I LA K + A+ P Sbjct: 445 NDKIIEKVAMQVTELFPSSRGLEVTWSS-----VVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSSSATAVP 552
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.333e-11 Identity = 41/103 (39.81%), Postives = 58/103 (56.31%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGK 310 + EII K++ LFP + + + VVK +S+Y+ P +P RP Q++PV+ F+LAG YTKQ Y+ SMEGA LSG+ + I LAA K Sbjct: 471 NEEIISRVSKQVLALFPSSQGLEVTWSS-----VVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAALRK 568
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.333e-11 Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 2 Query: 26 MKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 295 +K++ LFP +AD + + Y V+K +S+Y+ P + RP Q +P+ F+LAG YT+Q Y+ SMEGA LSG+ AQAI+ + L Sbjct: 397 LKQVKALFPS--AADLN---MTWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQAILANQARL 481
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.333e-11 Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 2 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ-DYVLLAARGKGRLAE 325 + EII K++ LFP + + + V+K +S+Y+ P +P RP Q++PVE F+LAG YTKQ Y+ SMEGA LSG+ + I L+A R K AE Sbjct: 468 NDEIIKRVTKQVLALFPSSQGLEVTWSS-----VLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAE 571
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.741e-11 Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 2 Query: 11 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGK 310 II+ K++ LFP + ++ VVK +S+Y+ P +P RP Q++PV+ F+LAG YTKQ Y+ SMEGA LSG+ A I LAA K Sbjct: 456 IIERVRKQVLDLFPSSQGLE-----VLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAALRK 550
BLAST of FC919314 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 5.067e-11 Identity = 33/91 (36.26%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 11 IIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 283 I +K++ +LFP + + Y VVK +S+Y+ P + RP Q++P+ F+LAG YT+Q Y+ SMEGA +SG+ A+ I+ + Sbjct: 391 IAQHVLKQVYELFPSS-----RELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDN 476 The following BLAST results are available for this feature:
BLAST of FC919314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919314 ID=FC919314; Name=FC919314; organism=Citrus clementina; type=EST; length=444bpback to top |