FC919321
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = -3 Query: 10 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXI-PLEEPTMMHDFAITENFVVVPDQQVVFKXKEM---IRGGSPVIYDKNKVSRFGILDKNATDASKMKWXXAP 399 G+++T+GR DF G+L +M AHPK DP+TG+ FA Y V P+L YF+F G K DV I + P+ +HDFAIT+ + + Q+ + + + GGSPV D K R G++ K A D S+MKW P Sbjct: 266 GDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPV-PPFLTYFRFDSAGKKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEMKWFEVP 398
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.495e-23 Identity = 59/158 (37.34%), Postives = 85/158 (53.80%), Query Frame = -3 Query: 1 VGHVXR*LALSXGRHSI-------GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVI-YDKNKVSRFGILDKNATDASKMKWXXAPDCF 450 V H + LALS G G+L+T+G D+ +L AHPKVDP TG++F Y PY+ Y S G V I + +P MMHDFAITEN+ + D + F+ KEM++ + + +D K +RFG+L + A D ++W P+CF Sbjct: 177 VYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHTA-PYVTYRVISKDGFMQDPVPITISDPVMMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKHIRWFELPNCF 333
BLAST of FC919321 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.558e-23 Identity = 53/134 (39.55%), Postives = 78/134 (58.21%), Query Frame = -3 Query: 1 GELKTVGRXDFSGQLKSTMIAHPKVDPVTGDLFAQSYDVVKKPYLKYFQFSPQGIKSPDVXIPLEEPTMMHDFAITENFVVVPDQQVVFKXKEMIRGGSPVI-YDKNKVSRFGILDKNATDASKMKWXXAPDCF 399 G+L+T+G D+ +L + AHPKVDP T ++F Y PY+ Y S G+ V I + MMHDFAITEN+ + D + F+ KEM++GG + +D K +RFG+L + A D S ++W P+CF Sbjct: 205 GDLQTLGLLDYDKRLSHSFTAHPKVDPFTDEMFTFGY-AHTPPYVTYRVISKDGVMRDPVPITIPASVMMHDFAITENYSIFMDLPLYFQPKEMVKGGKLIFSFDATKKARFGVLPRYAKDDSLIRWFELPNCF 337 The following BLAST results are available for this feature:
BLAST of FC919321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919321 ID=FC919321; Name=FC919321; organism=Citrus clementina; type=EST; length=482bpback to top |