FC919336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 8.174e-43 Identity = 89/202 (44.06%), Postives = 121/202 (59.90%), Query Frame = -1 Query: 3 IARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARK-PPNRTNTLTAQG-RTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFT 602 +A+ + +NTAGP HQA A+R D +V + C F+GYQDTLYV++ R+FYR C + GTVDFIFG +A V+QN I RK + NT+TA G GI++ NCR+ L P + +V T+LGRPWK++S TV + T + LI P GW W G+ + Y EY N GPG+ RV W V S ++V+ FT Sbjct: 367 MAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFT 566
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.068e-42 Identity = 90/202 (44.55%), Postives = 126/202 (62.38%), Query Frame = -1 Query: 3 IARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARK-PPNRTNTLTAQGRTDPNQ-STGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFT 602 +A+ I +NTAGP +QAVA R D +V + C F+GYQDTLYV++ R+FYR + GTVDFI G +A V+QN I RK P +TN +TA G+ GI++HNCR+ A +L+ + +VK++LGRPWK ++ T I T + LI P GW EW G+ T Y E+ N GPG++ A RV W + S ++V +FT Sbjct: 350 MAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFT 549
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 4.485e-41 Identity = 87/202 (43.07%), Postives = 121/202 (59.90%), Query Frame = -1 Query: 3 IARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARK-PPNRTNTLTAQGRTDP-NQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFT 602 +A+ I +NTAGP HQAVA+R D +V + C F+GYQDTLYV++ R+FYR + GTVDFIFG +A V+QN I RK + NT+TA G GI++ NCR+ L + V+++LGRPWK++S TV I + + +I P GW W G+ + Y EY N GPG+ T RV W + S ++V+ FT Sbjct: 374 MAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFT 573
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.889e-31 Identity = 72/189 (38.10%), Postives = 104/189 (55.03%), Query Frame = -1 Query: 51 IARDITIRNTA-----GPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKW 602 +A++IT RNT G QAVALR +D + F+ C G QDTLY H R +Y++C I G+VDFIFGNA + + C++ A ++ +TAQGR+ + TG C+VT L +LGR W +SR V+ T++D++I P GW W T++Y +Y TG G++ RV W Sbjct: 180 VAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA--IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAW 357
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.224e-30 Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = -1 Query: 51 IARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKW 602 IA +IT N+A + QAVA+R +D FY C F G+QDTLY+H +++ ++C I G+VDFIFGN+ +L++C+I + +TAQ R +STG + C +T S +LGRPW + R V T++D+ I GW W + + EY GPGS ++ RV W Sbjct: 105 IAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKS----QGFITAQSRKSSQESTGYVFLRCVITGNG------QSGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPW 278
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.935e-30 Identity = 66/184 (35.87%), Postives = 99/184 (53.80%), Query Frame = -1 Query: 51 IARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKW 602 + R +TI+N G +AVALR +D + FY C YQDTL + +++ C I G DFI G+A+ + + C++ + P N ++TAQ RT + +G C++T + TFLGRPW YSR V+ +F +++ P GW +W NT+YY EY GPG+ RV+W Sbjct: 137 VCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNN--GSITAQMRTSATEKSGFTFLGCKLTGSGS---------TFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEW 308
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.655e-27 Identity = 67/204 (32.84%), Postives = 106/204 (51.96%), Query Frame = -1 Query: 3 ARDITIRNTA-----GPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFT 599 A +I+ +NTA G + QAVAL+ D + FY C F G QDTL R F++ C I G++DFIFGN + ++C + + N +TA G+ TG + NC++T S + +LGR W+ Y+R ++ KT++ +++ GW + T+YY E+ GPG++ + RV Y L S + + FT Sbjct: 131 AYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENTIGCITANGKDTLKDRTGFVFVNCKIT---------GSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVT---YAKLLSDVEAAPFT 322
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.121e-26 Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = -1 Query: 51 AVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFA---RKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKW 551 AVA G D S FY F G QDTL+ R ++ C I G VDFI G+ + Q+C I + P T +TAQGRT+ N + G + NC V K +LGR W+ YSR ++ + L +++P GW EW+ L YAE+ G GS+T+ R KW Sbjct: 139 AVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLVHGFG---------KAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKW 299
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.121e-26 Identity = 65/189 (34.39%), Postives = 96/189 (50.79%), Query Frame = -1 Query: 57 ARDITIRNTA-----GPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNR---TNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRV 599 A +I+ +N A G + QAVALR D + FY C F G QDTL R F++EC I G++DFIFGN + Q+C I + N T ++TAQGR ++ +G NC++ + ++ LGR W Y+ V+ T++ +I P GW W T+ + E+ GPG+ RV Sbjct: 180 AYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKIDGSGEI---------LLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERV 359
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.186e-25 Identity = 67/187 (35.83%), Postives = 88/187 (47.06%), Query Frame = -1 Query: 51 ARDITIRNT----AGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKW 599 A IT NT AG QAVALR D +VFYR G QDTL+ + ++ +C I G VDFIFGNA + Q+C+I R + A R + TG NC ++ + +LGR W YSRTVY F+ +I P GW +W + + EY G G+ RV W Sbjct: 179 ATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDI--HSTAKRYGAIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPW 354 The following BLAST results are available for this feature:
BLAST of FC919336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919336 ID=FC919336; Name=FC919336; organism=Citrus clementina; type=EST; length=602bpback to top |