FC919336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 4.364e-20 Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = -1 Query: 51 AVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNT----LTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKW 551 AVA+ D S FY C F G QDT++ + R ++ C I G +DFIFG+ V ++C+I A + +TAQGR+ + +G + V S +LGR + +SR ++I+T L S+++P GW W + YAE G GS + RV W Sbjct: 101 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLR---------GSVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW 262
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19 Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = -1 Query: 57 IARDITIRNTA-GPNNH----QAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRV 602 +A +I ++NTA P+ QA+++R + + FY C F G+QDT+ + F+++C + GT DFIFG+ + + R + A + +G +C+VT +LGR W + + VY T + S++NP GW E T++Y EY +GPGS A RV Sbjct: 153 MAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRV--IAAHAGKSAEEKSGYSFVHCKVTGTGG--------GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRV 329
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19 Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = -1 Query: 57 IARDITIRNTA-GPNNH----QAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRV 602 +A +I ++NTA P+ QA+++R + + FY C F G+QDT+ + F+++C + GT DFIFG+ + + R + A + +G +C+VT +LGR W + + VY T + S++NP GW E T++Y EY +GPGS A RV Sbjct: 153 MAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVVGDGIRV--IAAHAGKSAEEKSGYSFVHCKVTGTGG--------GIYLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRV 329
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.829e-19 Identity = 52/168 (30.95%), Postives = 82/168 (48.81%), Query Frame = -1 Query: 51 QAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFARKPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKW 554 QA+++R + + FY C F GYQDT+ + F+++C I GT DFIFG+ + + + +TA + +G +C+VT + +LGR W + + VY T + S++NP+GW E T++Y EY TG GS RVK+ Sbjct: 151 QALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQL--NVVGDGIRVITAHAGKSAAEKSGYSFVHCKVTG--------TGTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTGTGSHKEKRVKY 308
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.027e-17 Identity = 71/193 (36.79%), Postives = 98/193 (50.78%), Query Frame = -1 Query: 66 QAVAL---RSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFAR-----KPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPW--------------KQYSRTVYIKTFLDSLINPAGWMEWSG-DFALNTLY-------YAEYMNTGPGSSTA 554 QAVAL +SG D + F S GYQDTLYV R F+ +C I GTVDFIFG+ + NC++ +R K N + LTA T+ NQ G++I N RV SD P +S LGRPW +TV++ T +D+ I GW + SG D NT++ + EY + G G++ + Sbjct: 153 QAVALYVTKSG-DRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVPAKS---YGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGAAVS 338
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.027e-17 Identity = 71/193 (36.79%), Postives = 98/193 (50.78%), Query Frame = -1 Query: 66 QAVAL---RSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNIFAR-----KPPNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPW--------------KQYSRTVYIKTFLDSLINPAGWMEWSG-DFALNTLY-------YAEYMNTGPGSSTA 554 QAVAL +SG D + F S GYQDTLYV R F+ +C I GTVDFIFG+ + NC++ +R K N + LTA T+ NQ G++I N RV SD P +S LGRPW +TV++ T +D+ I GW + SG D NT++ + EY + G G++ + Sbjct: 153 QAVALYVTKSG-DRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPS-TNINQKYGLVITNSRVIRESDSVPAKS---YGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHI--YGWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVS 338
BLAST of FC919336 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.957e-13 Identity = 37/73 (50.68%), Postives = 42/73 (57.53%), Query Frame = -1 Query: 375 DITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRRFYRECDIYGTVDFIFGNAAVVLQNCNI 593 D+ RNT P V LR D+S+ YRC E YQD LY H R+ YRE + TVDFI GNAA V Q C I Sbjct: 169 DMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241 The following BLAST results are available for this feature:
BLAST of FC919336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC919336 ID=FC919336; Name=FC919336; organism=Citrus clementina; type=EST; length=602bpback to top |