FC920175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_YERPG (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Angola) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 156 AGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN-AEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 +G + + L+L P +R S G ++ DV +RG+AL + V +E VAD + L++ R++ V+ G W + + G + K +GI+G+G IG +A+R F V Y SR + F C L A +D L I +T+QT+H+I ++ Sbjct: 52 SGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGRE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_YERPE (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 156 AGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN-AEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 +G + + L+L P +R S G ++ DV +RG+AL + V +E VAD + L++ R++ V+ G W + + G + K +GI+G+G IG +A+R F V Y SR + F C L A +D L I +T+QT+H+I ++ Sbjct: 52 SGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGRE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_YERPB (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 156 AGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN-AEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 +G + + L+L P +R S G ++ DV +RG+AL + V +E VAD + L++ R++ V+ G W + + G + K +GI+G+G IG +A+R F V Y SR + F C L A +D L I +T+QT+H+I ++ Sbjct: 52 SGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGRE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_YERPA (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 156 AGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN-AEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 +G + + L+L P +R S G ++ DV +RG+AL + V +E VAD + L++ R++ V+ G W + + G + K +GI+G+G IG +A+R F V Y SR + F C L A +D L I +T+QT+H+I ++ Sbjct: 52 SGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGRE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_YERP3 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.276e-13 Identity = 50/170 (29.41%), Postives = 83/170 (48.82%), Query Frame = 3 Query: 156 AGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN-AEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 +G + + L+L P +R S G ++ DV +RG+AL + V +E VAD + L++ R++ V+ G W + + G + K +GI+G+G IG +A+R F V Y SR + F C L A +D L I +T+QT+H+I ++ Sbjct: 52 SGGKIDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEWQESIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLCITLPMTEQTYHMIGRE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_KLEP7 (Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ghrB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.882e-13 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 168 VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINK 647 V A +L +P++R S G ++ DV R V L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R FG + YN+R + P F Y D+ L +D + + L+++THHL + Sbjct: 56 VDAALLEKMPKLRATSTVSVGYDNFDVEALNARRVLLMHTPTVLTETVADTVMALVLSTARRVVEVAERVKAGEWTKSIGPDW-FGTDVHHKTLGIVGMGRIGMALAQRAHFGFGMPILYNARRQHPQAEERFNARYCDLDTLLQEADFVCLILPLSEETHHLFGQ 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: VANH_ENTFC (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium GN=vanH PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 54/165 (32.73%), Postives = 85/165 (51.52%), Query Frame = 3 Query: 168 VTAEILRLLPE--VRLVVATSAGLNHIDVVECRRRGVALANAGNVFSED-VADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTY-PFYPDVCELAANSDVLIICCALTDQTHHLINKQ 650 ++A IL L V+ + S G NHID +R G+ + N +S D VADY + L++ +R + + V + + ++++ G L VG+VG G IG V +RL FGC V SR++ V Y PF EL NSD++ + L TH++I+ + Sbjct: 59 ISASILLALKRAGVKYISTRSIGCNHIDTTAAKRMGITVDNVA--YSPDSVADYTMMLILMAVRNVKSIVRSVEKHDFRLDSD--RGKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYSRSRSIEVNYVPF----DELLQNSDIVTLHVPLNTDTHYIISHE 215
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_PECCP (Glyoxylate/hydroxypyruvate reductase B OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ghrB PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 156 AGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWP--INAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 +G V + L+ P +R S G + +V +GV L + V +E VAD L L++ R++ V+ G W +++++ G+ + K +GI+G+G IG VA+R F V YN+R F C+ L A SD L I LT +THHLI ++ Sbjct: 48 SGGKVDKDFLQHAPRLRAASTISVGYDTFNVDALNEKGVILMHTPTVLTETVADTVLALMLASARRVVEVAERVKAGEWKGGVDSDW-FGTDVHHKTIGILGMGRIGLAVAQRAHFGFSMPVLYNARRHHAEAEQRFNARHCDLDTLLAESDFLCITLPLTTETHHLIGRE 217
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_SERP5 (Glyoxylate/hydroxypyruvate reductase B OS=Serratia proteamaculans (strain 568) GN=ghrB PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13 Identity = 63/221 (28.51%), Postives = 97/221 (43.89%), Query Frame = 3 Query: 42 EQFFTSNKFQYLKAYESALPLHEFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQSCWPWGKKELLL 686 EQ FT + F L H+ L + I S G + L+ P++R S G ++ DV V L + V +E VAD + L++ R++ V+ G W I A++ G + K +GI+G+G IG +A+R FG V YN+R F C+ L A SD + I LTD+T H+I++ K +L+ Sbjct: 20 EQHFTVHAFDGLTPDN-----HDELRQALQQAEGIIGSGGK-IDEAFLQQTPKLRAASTISVGYDNFDVDALNAHNVLLMHTPTVLTETVADTIMSLVLATARRVVEVAERVKAGEWQGSIGADW-FGVDVHHKTIGILGMGRIGLALAQRAHFGFGMPVLYNARRTHEEAEQRFNARRCDLDTLLAESDFICITLPLTDETFHMISRDQLAKMKKSGILI 233
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13 Identity = 51/181 (28.18%), Postives = 84/181 (46.41%), Query Frame = 3 Query: 126 AHSVKAIFSSAGAPVTAEILRLLPE-VRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPL-GSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSY-----NSRNKKPSVTYPFYPDVCELAANSDVLIICCALTDQTHHLINK 647 A SV A+ + E++ +PE ++ + S G +HID+ C+ RG+ + NA + + A+ A+ LL+ R+ + +R WP L G KL K +GI G GSIG +AKR + F + Y S + + S F+ + L + S + T +T + NK Sbjct: 44 AKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNK 224 The following BLAST results are available for this feature:
BLAST of FC920175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920175 ID=FC920175; Name=FC920175; organism=Citrus clementina; type=EST; length=687bpback to top |