FC920175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: Y1556_HAEIN (Putative 2-hydroxyacid dehydrogenase HI1556 OS=Haemophilus influenzae GN=HI1556 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12 Identity = 44/164 (26.83%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 177 EILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEF-----PLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPFYPDVCELAANSDVLIICCALTDQTHHLINKQS 653 E L+ LP+++L+ T+ G N++D+V G+A+ N S V ++ +GL+ + L+ + W + +F P+ + + G +G+ G G +G+EV + A G V Y + +K +V Y E+ +D++ + C LT+ T LIN ++ Sbjct: 57 ETLQQLPKLKLIAITATGTNNVDLVAAEEMGIAVRNVTGYSSTTVPEHVIGLIFSLKHSLAGWLRDQTEAKWAESKQFCYFDYPI-TDVRGSTLGVFGKGCLGTEVGRLANAVGMKVLY-AEHKDATVCREGYTPFDEVLKQADIVTLHCPLTETTKDLINAET 218
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = 3 Query: 183 LRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLG----GKRVGIVGLGSIGSEVAKRLEAFGC-CVSYNSRNKKPSVTYP--FYPDVCELAANSDVLIICCALTDQTHHLINKQS 653 L L V V T AG + IDV ++R + +AN ++ S AD + LL+ LR + + +G WP A GS G GK VGI+GLG IG + +RL+ FG Y++R++ PS Y E SD++ + L THHLIN ++ Sbjct: 77 LALPSSVVAVCHTGAGYDQIDVEPFKKRHIQVANVPDLVSNATADTHVFLLLGALRNFGIGNRRLIEGNWP-EAGPACGSPFGYDPEGKTVGILGLGRIGRCILERLKPFGFENFIYHNRHQLPSEEEHGCEYVGFEEFLKRSDIVSVNVPLNHNTHHLINAET 239
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ESCF3 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ghrB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 49/163 (30.06%), Postives = 80/163 (49.08%), Query Frame = 3 Query: 180 ILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 +L +P++R S G ++ DV R V L + V +E VAD + L++ R++ V+ G W I ++ GS + K +GIVG+G IG +A+R F + YN+R + P F Y D+ L +D + + LT++THHL + Sbjct: 60 LLEKMPKLRATSTISVGYDNFDVDALNARKVLLMHTPTVLTETVADTLMALILATSRRVVEVAERVKAGEWTASIGPDW-FGSDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRQHPQAEERFNARYCDLDTLLQEADFVCLILPLTEETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: DDH1_SCHPO (2-hydroxyacid dehydrogenase homolog 1 OS=Schizosaccharomyces pombe GN=SPAC186.07c PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 52/166 (31.33%), Postives = 86/166 (51.81%), Query Frame = 3 Query: 168 VTAEILRLLPE--VRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYN--SRNKKPSVTYPFYPDVCELAANSDVLIICCALTDQTHHLINKQ 650 V A+ L++L + +L+ AG N++D+ G+ + VA+Y +GLL+ + RK+ A VR+ + +N LG L GK +G++G G IG VAK L+ FGC V + NK+ + + E+ A +D L + C LT T HL++++ Sbjct: 56 VDADTLKVLAKNGTKLIALRCAGFNNVDLKAAADNGITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNG--LLGHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHDIKPNKELEKFGIQFVEQQEVLAKADFLCLHCPLTPDTEHLVDEK 219
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_YERE8 (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=ghrB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12 Identity = 60/208 (28.85%), Postives = 93/208 (44.71%), Query Frame = 3 Query: 42 EQFFTSNKFQYLKAYESALPLHEFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPIN-AEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 EQ FT N F+ L + E L+ + I S G + L P++R S G ++ DV +RG+AL + V +E VAD + L++ R++ V+ G W + + G + K +GI+G+G IG +A+R F V Y SR + F C L A D L I +T+QT+H+I + Sbjct: 20 EQHFTVNSFEGLSSDNQP----ELLSALQQAEGLIGS--GGKIDQAFLERAPKLRAASTISVGYDNFDVDALSQRGIALMHTPTVLTETVADTMMALVLSSARRVVELAERVKAGEWQDSIGDDWFGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEKRFGARRCSLDTLLAEVDFLCITLPMTEQTYHMIGPE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ECOL6 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O6 GN=ghrB PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12 Identity = 57/207 (27.54%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPFYPDVCE---LAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F C L SD + + LTD+THHL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCNLDTLLQESDFVCLILPLTDETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: VANH_ENTFA (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecalis GN=vanHB PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 7.647e-12 Identity = 49/151 (32.45%), Postives = 73/151 (48.34%), Query Frame = 3 Query: 201 VRLVVATSAGLNHIDVVECRRRGVALANAGNVFSED-VADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKPSVTYPFYPDVCELAANSDVLIICCALTDQTHHLINKQ 650 V+ + S G NHID R G+++ +S D VADYAL L++ +R + V Q + ++ G +L VG++G G IG V KRL FGC V ++K Y + EL NSD++ + L T HLI ++ Sbjct: 73 VKYISTRSIGCNHIDTTAAERMGISVGTVA--YSPDSVADYALMLMLMAIRGAKSTIHAVAQQNFRLDCV--RGKELRDMTVGVIGTGHIGQAVVKRLRGFGCRVLAYDNSRKIEAD---YVQLDELLKNSDIVTLHVPLCADTRHLIGQR 216 HSP 2 Score: 20.7866 bits (42), Expect = 7.647e-12 Identity = 10/27 (37.04%), Postives = 15/27 (55.56%), Query Frame = 2 Query: 65 IPILESIRISASSTRILDTTRALSEGH 145 IP L S ISA + ++ + +S GH Sbjct: 30 IPTLISDAISADNAKLAAGNQCISVGH 56
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_MACFA (D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH PE=2 SV=4) HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12 Identity = 38/132 (28.79%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 108 EFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFG 503 E L + + + VTA+++ ++++V G++++D+ R+GV + N N S A+ G+++ + R++ A ++ G W +F +G++L GK +GI+GLG IG EVA R+++FG Sbjct: 39 EELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWE-RKKF-MGTELNGKTLGILGLGRIGREVATRMQSFG 168
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_SHISS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella sonnei (strain Ss046) GN=ghrB PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.562e-12 Identity = 57/207 (27.54%), Postives = 94/207 (45.41%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++ S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+THHL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVDAALLEKMPKLHATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_PANTR (D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 37/132 (28.03%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 108 EFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFG 503 E L + + + VTA+++ ++++V G++++D+ R+G+ + N N S A+ G+++ + R++ A ++ G W +F +G++L GK +GI+GLG IG EVA R+++FG Sbjct: 39 EELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWE-RKKF-MGTELNGKTLGILGLGRIGREVATRMQSFG 168 The following BLAST results are available for this feature:
BLAST of FC920175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920175 ID=FC920175; Name=FC920175; organism=Citrus clementina; type=EST; length=687bpback to top |