FC920175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_MOUSE (D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 36/132 (27.27%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 108 EFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFG 503 E L + + + VTA+++ ++++V G++++D+ R+G+ + N N S A+ G+++ + R++ A ++ G W + + +G++L GK +GI+GLG IG EVA R+++FG Sbjct: 39 EELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKW--DRKKFMGTELNGKTLGILGLGRIGREVATRMQSFG 168
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_HUMAN (D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 37/132 (28.03%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 108 EFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFG 503 E L + + + VTA+++ ++++V G++++D+ R+G+ + N N S A+ G+++ + R++ A ++ G W +F +G++L GK +GI+GLG IG EVA R+++FG Sbjct: 39 EELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWE-RKKF-MGTELNGKTLGILGLGRIGREVATRMQSFG 168
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ECOL5 (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.249e-11 Identity = 57/207 (27.54%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V+ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+T+HL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVEQNAAIFAEAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETYHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: YEAA_SCHPO (Putative 2-hydroxyacid dehydrogenase UNK4.10 OS=Schizosaccharomyces pombe GN=SPACUNK4.10 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11 Identity = 46/155 (29.68%), Postives = 70/155 (45.16%), Query Frame = 3 Query: 189 LLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCVSYNSRNKKP--SVTYPFYPDVCELAANSDVLIICCALTDQTHHLINK 647 L P V+ + AG +DV C RG+ +++ + AD + L++ LR + + + W NA GK +GI+GLG IG +AKR AF + Y++R P + +L A SDVL + L T H+I K Sbjct: 77 LPPSVKFICHLGAGYETVDVAACTARGIQVSHVPKAVDDATADVGIFLMLGALRGFNQGIFELHKNNW--NANCKPSHDPEGKTLGILGLGGIGKTMAKRARAFDMKIVYHNRTPLPEEEAEGAEFVSFDDLLAKSDVLSLNLPLNAHTRHIIGK 229
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_ECOLU (Glyoxylate/hydroxypyruvate reductase B OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ghrB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.130e-11 Identity = 56/207 (27.05%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +++ AIF+ A V A +L +P++R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+T+HL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTIEQNAAIFAEAEGLLGSNENVDAALLGKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVHHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDSLLQESDFVCLILPLTDETYHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_PIG (D-3-phosphoglycerate dehydrogenase OS=Sus scrofa GN=PHGDH PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 36/132 (27.27%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 108 EFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFG 503 E L + + + VT++++ ++++V G++++D+ R+G+ + N N S A+ G+++ + R++ A ++ G W +F +G++L GK +GI+GLG IG EVA R+++FG Sbjct: 39 EELIAELQDCEGLIVRSATKVTSDVINAAKKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMILCLARQIPQATASMKDGKWE-RKKF-MGTELNGKVLGILGLGRIGREVATRMQSFG 168
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: GHRB_SHIDS (Glyoxylate/hydroxypyruvate reductase B OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ghrB PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 57/207 (27.54%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 75 LKAYESALPLHEFLTLHAHSVK---AIFSSA------GAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLW--PINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCVSYNSRNKKPSVTYPF---YPDVCELAANSDVLIICCALTDQTHHLINKQ 650 L+ + +H+ L +V AIF+ A V A +L +P +R S G ++ DV R + L + V +E VAD + L++ R++ V+ G W I ++ G+ + K +GIVG+G IG +A+R F + YN+R F Y D+ L SD + + LTD+T+HL + Sbjct: 16 LQRLQEHFTVHQVANLSPQTVDQNAAIFAEAEGLLGSNENVDAALLEKMPRLRATSTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDW-YGTDVYHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETYHLFGAE 221
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: SERA_BOVIN (D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 37/132 (28.03%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 108 EFLTLHAHSVKAIFSSAGAPVTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFG 503 E L + + + VT++I+ ++++V G++++D+ R+G+ + N N S A+ G+++ + R++ A ++ G W +F +G++L GK +GI+GLG IG EVA R+++FG Sbjct: 39 EELIAELQDCEGLIVRSATKVTSDIINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQAAASMKDGKWE-RKKF-MGTELNGKVLGILGLGRIGREVATRMQSFG 168
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: DDH2_SCHPO (2-hydroxyacid dehydrogenase homolog 2 OS=Schizosaccharomyces pombe GN=SPAC186.02c PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 3 Query: 168 VTAEILRLLPE--VRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAEFPLGSKLGGKRVGIVGLGSIGSEVAKRLE-AFGCCV-SYNSRNKKPSVTYPF-YPDVCELAANSDVLIICCALTDQTHHLINKQS 653 V A+ L+ L E V+LV G N++++ + + + + V+++ +GLL+ + RK+ A VR+ N LG + GK VG++G G IGS VAK + FGC V +Y+ K Y + + E+ +D L + C LT T H++N S Sbjct: 56 VDADTLKALAENGVKLVALRCGGYNNVNLKAASEYKITVVHVPSYSPFAVSEFTVGLLLSLNRKIHRAYVRVRED--DFNIVGLLGCDIHGKTVGVIGTGKIGSNVAKCFKMGFGCDVLAYDINPDKKLENYGVQFVEQNEVLKKADFLCLHCPLTPSTTHIVNSDS 220
BLAST of FC920175 vs. ExPASy Swiss-Prot
Match: CTBP2_XENLA (C-terminal-binding protein 2 OS=Xenopus laevis GN=ctbp2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 45/168 (26.79%), Postives = 84/168 (50.00%), Query Frame = 3 Query: 168 VTAEILRLLPEVRLVVATSAGLNHIDVVECRRRGVALANAGNVFSEDVADYALGLLIDVLRKLSAADCFVRQGLWPINAE-----FPLGSKLGGKRVGIVGLGSIGSEVAKRLEAFGCCV----SYNSRNKKPSVTYPFYPDVCELAANSDVLIICCALTDQTHHLIN 644 ++ E L +R+++ +G ++ID+ G+A+ N + E+ AD L ++++ R+++ +R+G P + E +++ G+ +GI+GLG IG VA R +AF V Y + + S+ + EL +SD + + C L + HHLIN Sbjct: 84 LSREDLEKFKALRIIIKIGSGYDNIDIKSAAELGIAVCNIPSASVEETADSTLCHILNLYRRVTWLHQAMREGNRPASVEQIREVAGGAARIRGETLGIIGLGRIGQAVALRAKAFNFTVIFYDPYLADGVERSLGLQRMATLQELLMHSDCITLHCNLNEHNHHLIN 251 The following BLAST results are available for this feature:
BLAST of FC920175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920175 ID=FC920175; Name=FC920175; organism=Citrus clementina; type=EST; length=687bpback to top |