FC920182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_SHIFL (D-erythrose-4-phosphate dehydrogenase OS=Shigella flexneri GN=epd PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_SHIF8 (D-erythrose-4-phosphate dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_SHIDS (D-erythrose-4-phosphate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_SHIBS (D-erythrose-4-phosphate dehydrogenase OS=Shigella boydii serotype 4 (strain Sb227) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_SHIB3 (D-erythrose-4-phosphate dehydrogenase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_SALEP (D-erythrose-4-phosphate dehydrogenase OS=Salmonella enteritidis PT4 (strain P125109) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN++E + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNELRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_SALDC (D-erythrose-4-phosphate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLF-GEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V+I INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ +V+ ++ LF G+ + + R ++PW E G + V++ TGV+ V+ S P S D VV GVN++E + E Sbjct: 3 VRIAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRF---AWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNELRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_ECOUT (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=epd PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDTTVVYGVNQDQLRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_ECOSM (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146
BLAST of FC920182 vs. ExPASy Swiss-Prot
Match: E4PD_ECOSE (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain SE11) GN=epd PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.735e-12 Identity = 46/147 (31.29%), Postives = 75/147 (51.02%), Query Frame = 3 Query: 84 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVV-GVNEHEYKPE 509 V++ INGFGRIGR V R + + R ++ +VA+N+ M ++ KYD+ HG++ + +D L G+ + V R+ + +PW E G + V++ TGV+ V+ S P S D VV GVN+ + + E Sbjct: 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINE-LADAAGMAHLLKYDTSHGRFAWEVRQERDQ--LFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAE 146 The following BLAST results are available for this feature:
BLAST of FC920182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920182 ID=FC920182; Name=FC920182; organism=Citrus clementina; type=EST; length=512bpback to top |