FC920191
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_META3 (50S ribosomal protein L3P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl3p PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 48/127 (37.80%), Postives = 77/127 (60.63%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGV-TRLPRKTHRGL-RKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 K L +KK ++EI++ G +++ + +A K++ I+ VF E ID + +TKGKG++G V RWG+ + + ++G+ R IG W P R+ +TV AGQ G+H RTE NK+I K+G+ E Sbjct: 146 KDTNLPKKKPEIIEIKIGGKNISDIIAYAKDIIGKKLSINDVFTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGKHQNKGVGRHTGSIGPWTPKRIMWTVPMAGQVGFHQRTEYNKRILKIGENGSE 272
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_THENV (50S ribosomal protein L3P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl3p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19 Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNG-GSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 + G+ +K L+EI + G SV +++ FA K + VF +++D+I VTKGKGY+GV+ R+GVT LPR K +G R+ IG PA + FT R GQ G+H RTE NK++ K+G E Sbjct: 153 LSGIGKKTPELLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA-LMFTQPRPGQMGFHQRTEYNKRVVKIGDNGAE 278
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_SULSO (50S ribosomal protein L3P OS=Sulfolobus solfataricus GN=rpl3p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.041e-19 Identity = 54/132 (40.91%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 392 RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK+I K+G +E + A Sbjct: 166 RKIPSLGKKAPDLVEIQIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGDEPKEINPA 295
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_SULAC (50S ribosomal protein L3P OS=Sulfolobus acidocaldarius GN=rpl3p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19 Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPA-RVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 392 L +K+ ++EIQ+ GGS+ ++++ KQIP+ VF++ ++ DIIGVTKGKG++GV+ R+ V PR K +G RK IGA P+ V + GQ G+H RTE NK+I K+G E + A Sbjct: 162 LGKKRPEIVEIQIGGGSIQDQLNYGLSLLGKQIPVRDVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRK---IGARGPSISTPSYVPQPGQLGFHRRTEYNKRIIKIGDNVNEINPA 286
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_NATPD (50S ribosomal protein L3P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl3p PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.359e-19 Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 3 Query: 9 MKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLG 365 + + +K+ +ME +V GGS++ +VDFA + + + VF+ E D+ G+TKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ LG Sbjct: 151 LSSVPKKEPDVMETRVGGGSLSDRVDFALDLVDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDLG 273
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_METMJ (50S ribosomal protein L3P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 3 Query: 6 KMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRK--VACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 ++ G+ +K LME+++ GGS+ ++ +A K+I I + E +D+ VT GKG EG V RWGV RK RG +K + +G WHP V + V + GQ GY RTE NK+I K+G E Sbjct: 151 ELTGVPKKVPDLMEMRIAGGSLEDQIAYAAEILGKEITISGNLEVGEYVDVTAVTTGKGTEGPVKRWGVQVRKRKHSRGGKKRHIGNLGPWHPHHVRWQVPQMGQMGYQQRTEFNKRILKIGADGDE 277
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_HALMA (50S ribosomal protein L3P OS=Haloarcula marismortui GN=rpl3p PE=1 SV=5) HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19 Identity = 49/122 (40.16%), Postives = 75/122 (61.48%), Query Frame = 3 Query: 24 QKKAHLMEIQVNGGSVAQKVDFAYGFFEK--QIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRG--LRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQ 377 +KK +ME +V GGSV+ ++D A E + ++ +F+ E D+ GVTKGKG +G V RWGV + K R R++ +G W+P+RV TV + GQ GYH RTE+NK++ +G+ + Sbjct: 157 KKKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDE 278
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_SULTO (50S ribosomal protein L3P OS=Sulfolobus tokodaii GN=rpl3p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 53/124 (42.74%), Postives = 76/124 (61.29%), Query Frame = 3 Query: 18 LKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPA-RVSFTVARAGQNGYHHRTEMNKKIYKLGKASQE 380 L +KK ++E+QV GG + ++++ K + + VF++ ++IDIIGVTKGKG++GVV R+GV LPR K +G RKV GA P+ V + GQ GYH RTE NK+I K+ E Sbjct: 163 LGKKKPEIVEVQVGGGDIKSQLNYVLNILGKPLSVKDVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKV---GARGPSFSTPSYVPQPGQMGYHRRTEYNKRILKISDDPNE 283
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_SULIY (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl3p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 54/132 (40.91%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 392 RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK+I K+G +E + A Sbjct: 166 RKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGDDPKEINPA 295
BLAST of FC920191 vs. ExPASy Swiss-Prot
Match: RL3_SULIN (50S ribosomal protein L3P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl3p PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 54/132 (40.91%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 3 RKMKGLKQKKAHLMEIQVNGGSVAQKVDFAYGFFEKQIPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPR--KTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKASQESHSA 392 RK+ L +K L+EIQ+ GG ++D+A K+I I VF++ ++ID++GVTKGKG+ GV+ R+ V LPR K +G RK+ G S+T + GQ G+H RTE NK+I K+G +E + A Sbjct: 166 RKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGP-SLGTPSYT-PQPGQLGFHRRTEYNKRIIKIGDDPKEINPA 295 The following BLAST results are available for this feature:
BLAST of FC920191 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920191 ID=FC920191; Name=FC920191; organism=Citrus clementina; type=EST; length=723bpback to top |