FC920199

Overview
NameFC920199
Unique NameFC920199
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920199 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.085e-81
Identity = 146/206 (70.87%), Postives = 170/206 (82.52%), Query Frame = 2
Query:   26 VDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNETEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIMRNCLIGGDDFKSGQTKMKSVLVDFLAGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNAVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGAQNTIVLHNTCEDSLLAA 643
            +D+V+VLWTANTER+  VI GLNDT ENLL ++     E+SPSTL+A+A +LE   F+NGSPQNT VPG ++LA  R   +GGDDFKSGQTK+KSVLVDFL G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKS+ VDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +G  NT+VLHNTCEDSLLAA
Sbjct:  220 LDKVIVLWTANTERFCEVIPGLNDTAENLLRTIQLG-LEVSPSTLFAVASILEGCAFLNGSPQNTLVPGALELAWQRRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPPQFRSKEVSKSSVVDDMVHSNPVLYSPGEQPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAA 424          
BLAST of FC920199 vs. ExPASy Swiss-Prot
Match: INO1_HUMAN (Inositol-3-phosphate synthase 1 OS=Homo sapiens GN=ISYNA1 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.851e-81
Identity = 146/206 (70.87%), Postives = 170/206 (82.52%), Query Frame = 2
Query:   26 VDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNETEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIMRNCLIGGDDFKSGQTKMKSVLVDFLAGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNAVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGAQNTIVLHNTCEDSLLAA 643
            +D+V+VLWTANTER+  VI GLNDT ENLL +++    E+SPSTL+A+A +LE   F+NGSPQNT VPG ++LA      +GGDDFKSGQTK+KSVLVDFL G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE+SKSN VDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +G  NT+VLHNTCEDSLLAA
Sbjct:  220 LDKVIVLWTANTERFCEVIPGLNDTAENLLRTIELG-LEVSPSTLFAVASILEGCAFLNGSPQNTLVPGALELAWQHRVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGENLSAPLQFRSKEVSKSNVVDDMVQSNPVLYTPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAA 424          
BLAST of FC920199 vs. ExPASy Swiss-Prot
Match: INO1_RAT (Inositol-3-phosphate synthase 1 OS=Rattus norvegicus GN=Isyna1 PE=2 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 9.185e-81
Identity = 143/206 (69.42%), Postives = 170/206 (82.52%), Query Frame = 2
Query:   26 VDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNETEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIMRNCLIGGDDFKSGQTKMKSVLVDFLAGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNAVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGAQNTIVLHNTCEDSLLAA 643
            +D+V+VLWTANTER+  V+ G NDT ENLL ++     E+SPSTL+A+A +LE   F+NGSPQNT VPG ++LA  R+  +GGDDFKSGQTK+KSVLVDFL G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+ VDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +G  NT+VLHNTCEDSLLAA
Sbjct:  220 LDKVIVLWTANTERFCEVVPGRNDTAENLLRTIQLG-LEVSPSTLFAVASILEGCAFLNGSPQNTLVPGALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVQSNRVLYAPGEEPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAA 424          
BLAST of FC920199 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.200e-80
Identity = 143/206 (69.42%), Postives = 171/206 (83.01%), Query Frame = 2
Query:   26 VDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNETEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIMRNCLIGGDDFKSGQTKMKSVLVDFLAGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNAVDDMVSSNGILYGPGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGAQNTIVLHNTCEDSLLAA 643
            +D+V+VLWTANTER+  V+ G NDT ENLL ++     E+SPSTL+A+A +LE+  F+NGSPQNT VPG ++LA  R+  +GGDDFKSGQTK+KSVLVDFL G+G+K  SIVSYNHLGNNDG NLSAP  FRSKE++KS+ VDDMV SN +LY PGE PDH VVIKYVPYVGDSKRA+DEYTSE+ +G  NT+VLHNTCEDSLLAA
Sbjct:  220 LDKVIVLWTANTERFCEVVPGRNDTAENLLHTIQLG-LEVSPSTLFAVASILEDCAFLNGSPQNTLVPGALELASQRHVFVGGDDFKSGQTKVKSVLVDFLIGSGLKTMSIVSYNHLGNNDGQNLSAPLQFRSKEVTKSSVVDDMVHSNHVLYAPGERPDHCVVIKYVPYVGDSKRALDEYTSELMLGGTNTLVLHNTCEDSLLAA 424          
BLAST of FC920199 vs. ExPASy Swiss-Prot
Match: INO1_CANGA (Inositol-3-phosphate synthase OS=Candida glabrata GN=INO1 PE=3 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.375e-74
Identity = 135/214 (63.08%), Postives = 166/214 (77.57%), Query Frame = 2
Query:   17 ENKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNETEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIMRNCLIGGDDFKSGQTKMKSVLVDFLAGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNAVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGAQNTIVLHNTCEDSLLAATSI 652
            +N +D+V++LWTANTERY  ++ G+NDT+ENLL ++  + TEI+PST++A A +LE+ P+INGSPQNTFVPGLI+LA   + LI GDDFKSGQTKMKSVL  FL  AGI+P SI SYNHLGNNDG NLS+PQ FRSKEISK++ VDD++ SN ILY    G   DH +VIKY+  VGDSK AMDEY SE+ +G  N I +HN CEDSLLA   I
Sbjct:  236 QNDLDKVIILWTANTERYVEILPGVNDTMENLLEAIKNDHTEIAPSTIFAAASILEHCPYINGSPQNTFVPGLIELAEKNDSLIAGDDFKSGQTKMKSVLAQFLVDAGIRPVSIASYNHLGNNDGYNLSSPQQFRSKEISKASVVDDIIESNPILYNDKLGNKIDHCIVIKYMHAVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLI 449          
BLAST of FC920199 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.087e-73
Identity = 131/214 (61.21%), Postives = 169/214 (78.97%), Query Frame = 2
Query:   17 ENKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNETEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIMRNCLIGGDDFKSGQTKMKSVLVDFLAGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNAVDDMVSSNGILYG--PGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGAQNTIVLHNTCEDSLLAATSI 652
            +N++D+V++LWTANTERY++V+  +NDT +NL+ S+ ++  EI+PST++A+A +LE +P+INGSPQNTFVPG+I+LA   +  IGGDDFKSGQTK+KSVL  FL  AGIKP SI SYNHLGNNDG NLS+P+ FRSKEISK + VDD++ SN +LY    G+  DH +VIKY+P VGDSK AMDEY SE+ +G  N I +HN CEDSLLA   I
Sbjct:  225 KNELDKVIILWTANTERYADVLPNVNDTADNLIKSIKESHEEIAPSTVFAVASILEKVPYINGSPQNTFVPGVIELAEKYDSFIGGDDFKSGQTKIKSVLAQFLVDAGIKPLSIASYNHLGNNDGYNLSSPKQFRSKEISKQSVVDDIIESNELLYNKESGDKVDHCIVIKYLPAVGDSKVAMDEYYSELMLGGHNKISIHNVCEDSLLATPLI 438          
BLAST of FC920199 vs. ExPASy Swiss-Prot
Match: INO1_YEAST (Inositol-3-phosphate synthase OS=Saccharomyces cerevisiae GN=INO1 PE=1 SV=3)

HSP 1 Score: 273.478 bits (698), Expect = 7.049e-73
Identity = 135/214 (63.08%), Postives = 162/214 (75.70%), Query Frame = 2
Query:   17 ENKVDRVVVLWTANTERYSNVIVGLNDTVENLLASLDKNETEISPSTLYAIACVLENIPFINGSPQNTFVPGLIDLAIMRNCLIGGDDFKSGQTKMKSVLVDFLAGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNAVDDMVSSNGILYGP--GEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGAQNTIVLHNTCEDSLLAATSI 652
            EN +D+V+VLWTANTERY  V  G+NDT+ENLL S+  +  EI+PST++A A +LE +P+INGSPQNTFVPGL+ LA      I GDD KSGQTK+KSVL  FL  AGIKP SI SYNHLGNNDG NLSAP+ FRSKEISKS+ +DD+++SN ILY    G+  DH +VIKY+  VGDSK AMDEY SE+ +G  N I +HN CEDSLLA   I
Sbjct:  233 ENALDKVIVLWTANTERYVEVSPGVNDTMENLLQSIKNDHEEIAPSTIFAAASILEGVPYINGSPQNTFVPGLVQLAEHEGTFIAGDDLKSGQTKLKSVLAQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKLGKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLI 446          
The following BLAST results are available for this feature:
BLAST of FC920199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_BOVIN1.085e-8170.87Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]
INO1_HUMAN1.851e-8170.87Inositol-3-phosphate synthase 1 OS=Homo sapiens GN... [more]
INO1_RAT9.185e-8169.42Inositol-3-phosphate synthase 1 OS=Rattus norvegic... [more]
INO1_MOUSE1.200e-8069.42Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_CANGA6.375e-7463.08Inositol-3-phosphate synthase OS=Candida glabrata ... [more]
INO1_CANAL1.087e-7361.21Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_YEAST7.049e-7363.08Inositol-3-phosphate synthase OS=Saccharomyces cer... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32005C07EF RVDevelop1 Citrus clementina cDNA clone C32005C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920199 ID=FC920199; Name=FC920199; organism=Citrus clementina; type=EST; length=669bp
TTAGAGAGTTTCAGGAGAAAACAAGGTGGATAGGGTTGTTGTACTGTGGA
CTGCTAACACTGAGAGGTACAGCAATGTGATTGTTGGGCTAAATGACACA
GTGGAGAACCTTCTTGCTTCACTGGACAAAAACGAAACTGAGATTTCTCC
TTCCACCTTGTATGCTATTGCTTGTGTTCTTGAAAATATCCCTTTCATCA
ATGGAAGCCCCCAAAACACCTTTGTACCAGGGCTTATTGACTTGGCTATT
ATGAGGAACTGTTTGATTGGTGGAGATGACTTCAAGAGTGGGCAGACTAA
GATGAAATCTGTTTTGGTTGATTTCCTTGCTGGGGCAGGAATCAAGCCAA
CATCAATTGTTAGCTACAACCACTTGGGAAACAATGATGGAATGAATCTT
TCAGCCCCTCAAACCTTCCGCTCCAAGGAGATTTCCAAAAGTAATGCTGT
TGATGACATGGTCTCCAGCAATGGTATCCTTTATGGGCCTGGTGAACACC
CCGACCACGTTGTGGTCATCAAGTATGTGCCATATGTTGGCGATAGCAAG
AGAGCCATGGATGAGTACACATCAGAAATTTTCATGGGTGCGCAGAACAC
CATTGTGCTGCACAACACGTGTGAGGACTCTCTTTTGGCTGCTACATCGA
TCTAGATTTGGTTCTGCTG
back to top