FC920206

Overview
NameFC920206
Unique NameFC920206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15364 contig Ccv1_Contig15364:26..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC920206 vs. ExPASy Swiss-Prot
Match: MPCP_YEAST (Mitochondrial phosphate carrier protein OS=Saccharomyces cerevisiae GN=MIR1 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 3 
Query:  291 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKY-KSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIA 680
            V AAP+ P     YS + Y    + G + CG TH+++ P+D+VK  +Q++P  Y K +   F  ++  +G      G+ PTLLGYS QGA              D  G + A++YK  +Y+  +A AEF+A
Sbjct:    3 VSAAPAIP----QYSVSDYMKFALAGAIGCGSTHSSMVPIDVVKTRIQLEPTVYNKGMVGSFKQIIAGEGAGALLTGFGPTLLGYSIQGAFKFGGYEVFKKFFIDNLGYDTASRYKNSVYMGSAAMAEFLA 129
The following BLAST results are available for this feature:
BLAST of FC920206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_YEAST9.079e-1534.35Mitochondrial phosphate carrier protein OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionC32005D02EF RVDevelop1 Citrus clementina cDNA clone C32005D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920206 ID=FC920206; Name=FC920206; organism=Citrus clementina; type=EST; length=680bp
CGGGTTCTACAAATTGGAACCGAGAGACAGGAGGAGGAGAAGAGAAAGAG
AAAATTAGAAGAATTCTCTCTGTCTCGCTCTTTTTCTCTATAATTCAATC
AAGCTTTTTACTCTCAAAATCAAATTTCAAAAATTCCGAAATGGCCCTCA
CAGAATCTTATAGGAAAAACTCTCTGATACCAAGCTACCTCTACTCCTCC
CAAACATCCTTCCCGTCCACGGCGGCTTTCAATGGAGCGGCAGCAGCCGC
CACGTCGCCGGCTACTCCATCCACGGCGAGGAGGAGCTTCGTTGTTGCGG
CACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCTGCATTCTACGCC
GCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTCTCACTCACACGGCCGT
CACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTGATCCTGTTAAGT
ATAAAAGCATATCATCTGGTTTTGGGGTTTTGCTCAAGGAACAGGGAATC
AGGGGCTTCTTCAGGGGATGGGTACCTACCTTGCTTGGTTACAGCGCCCA
AGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTCAAGAAGTACTACTCTG
ACATTGCTGGTCCAGAGTATGCTGCTAAGTACAAGACTTTAATCTACCTT
GCTGGCTCTGCTTCTGCTGAGTTCATTGCT
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