FC920208
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_BLEAM (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma americanum GN=eRF1 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.220e-53 Identity = 98/165 (59.39%), Postives = 134/165 (81.21%), Query Frame = 2 Query: 221 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLY-NKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNTE 709 +G E +NIE WKIK+LI L+ ARGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V +A+TS ++RLKLY N++P NGL+LY G V+ ++G EKK TIDF+P++ IN +LY+CDNKFHT+ L +LL D +FGFI++DGNGTLFGTL GNT+ Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGTLFGTLQGNTK 166
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_BLEMU (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma musculus GN=eRF1 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.094e-52 Identity = 97/164 (59.15%), Postives = 132/164 (80.49%), Query Frame = 2 Query: 221 DGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLY-NKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 +G E +NIE WKIK+LI L+ ARGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V +A+TS ++RLKLY N++P NGL+LY G V+ ++G EKK TIDF+P++ IN +LY+CDNKFHT+ L +LL D +FGFI++DGNG LFGTL GNT Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGALFGTLQGNT 165
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_TRYBB (Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma brucei brucei GN=ERF1 PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.039e-51 Identity = 97/160 (60.62%), Postives = 130/160 (81.25%), Query Frame = 2 Query: 230 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNTE 709 E++K IE +K+KKLI+ LESARG GTS+IS+ M P++QIS + L +E+GTASNIKS N+ SV +AIT++ RLK YN++PPNGL+LY GTV+T + KEKK+T+D EPFKP++ SLYLCDNKFHTE L+ +LESD +FGFIV+DG+GT + TL G+ + Sbjct: 8 ESEKAIERYKVKKLIQMLESARGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIKSHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKEKKLTLDIEPFKPVSRSLYLCDNKFHTEELHRMLESDEKFGFIVVDGSGTTYATLCGSVK 167
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.737e-51 Identity = 96/165 (58.18%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 215 MSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNTE 709 M + + +NIE +KIKKL+ L + RG+GTSM+SLI+PP+ QI+ TK++ DEF A+NIK RVNRQSV A+ SA QRLKLY + P NGL+LY G V+ ++GKE K+ IDFEP+KPIN SLY CD+KFH + L LLE+D FGFIVMDG G L+ L GNT+ Sbjct: 1 MEEKDQRQRNIEHFKIKKLMTRLRNTRGSGTSMVSLIIPPKKQINDSTKLISDEFSKATNIKDRVNRQSVQDAMVSALQRLKLYQRTPNNGLILYCGKVLNEEGKEIKLLIDFEPYKPINTSLYFCDSKFHVDELGSLLETDPPFGFIVMDGQGALYANLQGNTK 165
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_GIALA (Eukaryotic peptide chain release factor subunit 1 OS=Giardia lamblia GN=ERF1 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.167e-49 Identity = 96/170 (56.47%), Postives = 129/170 (75.88%), Query Frame = 2 Query: 191 LQFQPVPTMSDGQETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSG 700 + P S+G++ ++ I IW++K+ I+ LES G+GTS+ISL++PP +Q+S VT ML +E+GTASNIKSRVN+ +VL+AITSA RLKLYN++PPNGL +Y G + +DGK KV ID+ P+KPI+ +YLCD+KFHTE L ELL +D FGFI+MDG TL TLSG Sbjct: 1 MSINPDAPQSNGEQ-ERQIAIWQLKRTIEKLESYTGSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNKNAVLSAITSAMSRLKLYNRLPPNGLAVYCGE-IEEDGKNTKVVIDYTPYKPISNFIYLCDSKFHTEHLRELLTNDDTFGFIIMDGKETLMATLSG 168
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_DIDNA (Eukaryotic peptide chain release factor subunit 1 OS=Didinium nasutum GN=eRF1 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 8.236e-49 Identity = 92/159 (57.86%), Postives = 125/159 (78.62%), Query Frame = 2 Query: 230 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 E ++N+E++++K+LI LES +G+GTSMI+LI+ +DQI+ +ML +E G ASNIKSRV RQ+V A+TS ++LKLYNK PPNGLV++ G V +DG EK + ID EPFKPIN +LY CD+ FHTE + +LLE + +FGFI+MDGNG+LFGTL G+T Sbjct: 9 EYERNVEMFRLKRLIAKLESMKGSGTSMITLIINFKDQINIHARMLAEEVGKASNIKSRVTRQNVTDALTSTLEKLKLYNKTPPNGLVIFCGLVQQEDGGEKMIKIDLEPFKPINTTLYKCDSVFHTEEVRKLLEDNDKFGFIIMDGNGSLFGTLQGST 167
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_OXYTR (Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha trifallax GN=ERF1 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.835e-48 Identity = 93/169 (55.03%), Postives = 123/169 (72.78%), Query Frame = 2 Query: 206 VPTMSDGQETD-KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 V +++ GQ +D K+IE+WK+KKLI LE +GNGTSM+SLI+PP+D I++ K+L E A NIKSR+ +QSV+ AITS +++LKLY + P NGL LY G + +DGK EKK+ DFEPF+PIN LY C KF TE L LL D +FGFI++DGNG L+ TL GN+ Sbjct: 2 VESIAAGQVSDNKHIEMWKVKKLISKLEHCKGNGTSMVSLIIPPKDDINKYGKLLTGEMSAAQNIKSRITKQSVVTAITSTKEKLKLYKQTPTNGLCLYCGVIYMEDGKTEKKINFDFEPFRPINQFLYFCGGKFQTEPLLSLLADDDKFGFIIVDGNGALYATLQGNS 170
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_STYMT (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia mytilus GN=ERF1 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.972e-48 Identity = 91/169 (53.85%), Postives = 124/169 (73.37%), Query Frame = 2 Query: 206 VPTMSDGQETD-KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 V +++ GQ D K+IE+WKIK+LI LE+ +GNGTSM+SLI+PP++ I++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G ++ +DGK EKK+ DFEPF+PIN +Y C KF TE L LL D +FGFI++DGNG L+ TL GN+ Sbjct: 2 VESIAAGQVGDNKHIEMWKIKRLINKLENCKGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNS 170
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_STYLE (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia lemnae GN=ERF1 PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.972e-48 Identity = 91/169 (53.85%), Postives = 124/169 (73.37%), Query Frame = 2 Query: 206 VPTMSDGQETD-KNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGK-EKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 V +++ GQ D K+IE+WKIK+LI LE+ +GNGTSM+SLI+PP++ I++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G ++ +DGK EKK+ DFEPF+PIN +Y C KF TE L LL D +FGFI++DGNG L+ TL GN+ Sbjct: 2 VESIAAGQVGDNKHIEMWKIKRLINKLENCKGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNS 170
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: ERF1_DILMA (Eukaryotic peptide chain release factor subunit 1 OS=Dileptus margaritifer GN=eRF1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.454e-45 Identity = 88/159 (55.35%), Postives = 119/159 (74.84%), Query Frame = 2 Query: 230 ETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSGNT 706 E ++++E++++KKLI L++ +G+GTSMISLI+ +DQI+ KML DE G ASNIKSRV RQ+V A+TS ++LKLYNK P NGL++Y G D EK ID EPFKPIN SLY CD+ FHTE + +LLE + +FGF++MDGNG+LFG++ G T Sbjct: 9 EYERSVEMFRLKKLIHKLDNLKGSGTSMISLIINYKDQINPFMKMLVDEVGKASNIKSRVTRQNVTDALTSTMEKLKLYNKTPNNGLIIYCGLASEGDSGEKMFKIDMEPFKPINTSLYRCDSVFHTEEVKKLLEDNDRFGFLIMDGNGSLFGSVQGAT 167 The following BLAST results are available for this feature:
BLAST of FC920208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920208 ID=FC920208; Name=FC920208; organism=Citrus clementina; type=EST; length=724bpback to top |