FC920208
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: RF1_AERPE (Peptide chain release factor subunit 1 OS=Aeropyrum pernix GN=prf1 PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16 Identity = 51/163 (31.29%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 215 MSDGQETDK-NIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSG 700 MS G+ ++ I ++ +L+K L+ T ++SL +PP +S V +L E+ NIK + RQ+V A+++A RL++ PPNGLVL+ G D K F P +PI Y D +F T+ L +++E + G I+++ + G L G Sbjct: 1 MSQGRLEERLTISKRELARLLKELKKWSAPATVLLSLYIPPGRPLSDVMTLLRQEYSITDNIKLKRTRQAVKRALSAAMDRLQMLTSTPPNGLVLFCG---EDMSTGKFECFMFSPPEPIRVFYYRTDKRFITDFLEDMVEDNNAIGIIIVERDQATIGLLKG 160
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: RF1_SULSO (Peptide chain release factor subunit 1 OS=Sulfolobus solfataricus GN=prf1 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.956e-14 Identity = 50/149 (33.56%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 257 KIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTG-TVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSG 700 ++K LIK L+ + T ++SL +PP I V +L E+ A NIK + R +VL+AI +A RL K+ NGLVL+ G T+D K F P + Y D +FH E L +++E +G I+++ + G L G Sbjct: 12 ELKALIKELKKWKAPATVLLSLYIPPGRPIPDVVNLLRQEYSIAQNIKLKRTRDAVLSAIGAAIDRLNKIPKIDGNGLVLFCGENFDTEDFK----CFMFSPPDKVPLFFYRTDKEFHLEFLEDMVEDTAVYGLIIVERDEATIGLLKG 156
BLAST of FC920208 vs. ExPASy Swiss-Prot
Match: RF1_PYRAE (Peptide chain release factor subunit 1 OS=Pyrobaculum aerophilum GN=prf1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13 Identity = 42/148 (28.38%), Postives = 72/148 (48.65%), Query Frame = 2 Query: 257 KIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTVVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDXQFGFIVMDGNGTLFGTLSG 700 +++ + L+ +G T++I+L + I V +L E+ TA+NIK + R V + LK K P NG+ ++ G + + G + V P +PIN Y+CD FHTE L + L + +G +V++ + L G Sbjct: 18 ELRAFVNLLKKFKGYATTLITLYINAERPIPDVVNLLRSEWSTAANIKDKTTRTHVQDTLERIINNLKGEAKAPENGMAVFAGFHMINQGNYEWVYYVVIPPQPINTFKYICDTAFHTELLEDQLHAGVVYGIVVIERGEAVIALLKG 165 The following BLAST results are available for this feature:
BLAST of FC920208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920208 ID=FC920208; Name=FC920208; organism=Citrus clementina; type=EST; length=724bpback to top |