FC920231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_CHLTR (Ribulose-phosphate 3-epimerase OS=Chlamydia trachomatis GN=rpe PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.445e-30 Identity = 67/157 (42.68%), Postives = 99/157 (63.06%), Query Frame = 2 Query: 206 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 R + K ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG FVPNIT GP VV A+ T+L L+VH MI P + V F+KAGAD + VH E + I ++ I+ G +AGV +P TS+ + + + D++L+MSV+PGF G F Sbjct: 2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENI--KEIISYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVILLMSVHPGFCGQKF 156
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_MYCTU (Ribulose-phosphate 3-epimerase OS=Mycobacterium tuberculosis GN=rpe PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 69/147 (46.94%), Postives = 96/147 (65.31%), Query Frame = 2 Query: 236 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG VV++L VTD+P+D HLMI P++ P + +AGA V+ H E +T + I+ GAKAG+ + P T L +L D +L+MSV PGFGG F Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRF 151
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_MYCBO (Ribulose-phosphate 3-epimerase OS=Mycobacterium bovis GN=rpe PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 69/147 (46.94%), Postives = 96/147 (65.31%), Query Frame = 2 Query: 236 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 +++PSIL+A+FA+L ++ AV G DW+HVDVMDG FVPN+TIG VV++L VTD+P+D HLMI P++ P + +AGA V+ H E +T + I+ GAKAG+ + P T L +L D +L+MSV PGFGG F Sbjct: 9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRF 151
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_CHLMU (Ribulose-phosphate 3-epimerase OS=Chlamydia muridarum GN=rpe PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.583e-30 Identity = 65/151 (43.05%), Postives = 97/151 (64.24%), Query Frame = 2 Query: 224 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 K ++++PSI+ A+ A LG+ + +E +G + IH+DVMDG FVPNIT GP ++ A+ TDL L+VH MI P + V F+KAGAD + VH E + +L L+ I+ G +AG+ +P TS+ I + + D++L+MSV PGF G F Sbjct: 3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRSTDLFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAE--NLKEILDYIRKCGVQAGIAFSPETSIEFISAFIPLCDVILLMSVQPGFCGQKF 151
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_HELPY (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori GN=rpe PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.689e-29 Identity = 67/146 (45.89%), Postives = 97/146 (66.44%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP+V++ + ++ +PLDVHLM+ F I+S+H E H HR L IK+LG G+VLNP T +I+ +L+ V LVL+MSVNPGFGG F Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLDVHLMVENASFFAELFAPLKPQIISIHAENEK--HPHRVLQLIKNLGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKF 144
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_CHLPN (Ribulose-phosphate 3-epimerase OS=Chlamydia pneumoniae GN=rpe PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29 Identity = 65/151 (43.05%), Postives = 95/151 (62.91%), Query Frame = 2 Query: 224 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 + ++V PSI+ A+ LG + K +E AG D+IH+D+MDG FVPN+T GP ++ A+ TDL L+VH MI P + + F+++GAD + VH E S I L+ IK G +AG+ +P TS+ + L D+V++MSV PGF G SF Sbjct: 4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDI--KELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFCDVVVLMSVYPGFTGQSF 152
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_HELPJ (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori J99 GN=rpe PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29 Identity = 66/146 (45.21%), Postives = 96/146 (65.75%), Query Frame = 2 Query: 239 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 V+PS+LSA+F L +++++V A D++HVDVMDG +VPN+T+GP++++ + ++ +PLDVHLM+ V F I+S+H E H HR L IK G G+VLNP T +I+ +L+ V LVL+MSVNPGFGG F Sbjct: 3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLDVHLMVENASFFVELFAPLNPQIISIHAENEK--HPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKF 144
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_BUCBP (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpe PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.419e-29 Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 2 Query: 236 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP---LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 ++S S+LSANF++LGE + V +G D IH DVMD +V N+T GP+V+++LR V + +DVHLM + + F K +I+S H E ST ++ +T+ IK G K G+ LNP T L ++ VLD +DL+L+MSVNPGF G F Sbjct: 5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKSMVIDVHLMTCPVDDLIIKFAKLDVNIISFHPE--STNNVEKTIKLIKSYGCKVGLALNPLTPLCVLDNVLDKIDLILLMSVNPGFPGQKF 152
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_MYCLE (Ribulose-phosphate 3-epimerase OS=Mycobacterium leprae GN=rpe PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.439e-28 Identity = 67/147 (45.58%), Postives = 96/147 (65.31%), Query Frame = 2 Query: 236 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 +++PSIL+A+FA+L ++ V A DW+HVDVMDG FVPN+TIG VV +L +D+P+D HLMI P++ P + +AGA V+ H E +T + + I+ GAKAG+ + P T L+ +L D +LIMSV PGFGG +F Sbjct: 4 LIAPSILAADFARLTDEAAVV--ASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVAHDIRTAGAKAGIGVKPGTPLNPYLDILPHFDTLLIMSVEPGFGGQAF 146
BLAST of FC920231 vs. ExPASy Swiss-Prot
Match: RPE_METJA (Ribulose-phosphate 3-epimerase OS=Methanocaldococcus jannaschii GN=rpe PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.086e-26 Identity = 66/148 (44.59%), Postives = 94/148 (63.51%), Query Frame = 2 Query: 233 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGASF 676 I + SILSA+F L E++K E AG D+ HVD+MDG FVPNI++G + ++ +T+LP++VHLM+ + V +F + D ++ H E + R +N+IK +GAK V LNPAT L AIE +L V VL+M+V PGF G F Sbjct: 2 IKIGASILSADFGHLREEIKKAEEAGVDFFHVDMMDGHFVPNISMGIGIAKHVKKLTELPVEVHLMVENVDLFVNEFEE--MDYITFHIE--AVKFPFRIINRIKSIGAKPIVALNPATPLDAIEYILGDVYAVLVMTVEPGFSGQKF 145 The following BLAST results are available for this feature:
BLAST of FC920231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920231 ID=FC920231; Name=FC920231; organism=Citrus clementina; type=EST; length=677bpback to top |