FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_NEIG2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria gonorrhoeae (strain NCCP11945) GN=gatA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.576e-20 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++++A +LA YL+ + P L +I + + L EA++ D++I + N L GV V KD C S S++L+N+ P+ AT V+ + + + +G+TN+DEF MGST E+S + NPW+ VP R +LGSDTG Sbjct: 16 KQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQG-NASALTGVPVAYKDIFCQTGWRSACASKMLDNFVSPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BORA1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella avium (strain 197N) GN=gatA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20 Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R V+A +LAE+ L+ + A L +F+H+ + L +A++ D + GPLAG+ + KD T STAGS++L +Y PFDAT V++++ + +GK N DEF MGS E+S+F NPWD++ VP R + G+DTG Sbjct: 23 RRVSAVELAESGLAAAQAAAG-LNAFLHIDPELTLVQARAADAALAAG-TAGPLAGIPIAHKDAFVTRGWRSTAGSKMLRDYLSPFDATVVERLQAAGAVSLGKLNCDEFAMGSGNENSAFGPARNPWDLAAVPGGSSGGSAAAVAARLVAGATGTDTG 179
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_THIDA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20 Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++V++ +LA+ YL R+ P + +FI V L EA + D I GPL GV + KD CT +T GS++L N+ P+DA +++ K +GKTN+DEF MGS+ E+S F NPW+ VP R + G+DTG Sbjct: 16 KQVSSRELAQQYLDRIAALNPTINAFITVDPEKTLAEAAAADALIAGGA-AGPLTGVPIAHKDIFCTDGWLTTCGSKMLANFVAPYDAHVIERCKAAGMPSLGKTNMDEFAMGSSNETSFFGAVKNPWNAGYVPGGSSGGAAACVAARMAPAATGTDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_NEIG1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++++A +LA YL+ + P L +I + + L EA++ D++I + N L GV V KD C S S++L+N+ P+ AT V+ + + + +G+TN+DEF MGST E+S + NPW+ VP R +LGSDTG Sbjct: 16 KQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQG-NASALTGVPVAYKDIFCQTGWRSACASKMLDNFIFPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLL2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=gatA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.738e-20 Identity = 53/158 (33.54%), Postives = 82/158 (51.90%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R +T ++ YL R+ +++A+ +D K+ G L G+ + +KDNI T SR+LENY +DATAV++++ D + +GKTN+DEF MGS+ E+S+F NP+D +RVP + +LGSDTG Sbjct: 16 RRITCEKVVLDYLERIDRHRDDNIYITVFHEQAVEKARKLDKKLSEGGLPGKLFGMPMAIKDNISIKGAGLTCASRILENYESVYDATAVQRLEAEDAVFLGKTNMDEFAMGSSNENSAFGAVPNPFDKTRVPGGSSGGSAAAVAAGLALAALGSDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_STAAU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Staphylococcus aureus GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20 Identity = 49/159 (30.82%), Postives = 91/159 (57.23%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSN-NVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +++ + + + ++ +P +KSF+ + N +K+AQ +D+ +++ G L G+ +G+KDNI T + +T S++LE + P +++T ++K+ + +++GK N+DEF MG +TE+S + T NP+D VP SLGSDTG Sbjct: 18 KKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSISKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_NEIM0 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Neisseria meningitidis serogroup C (strain 053442) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20 Identity = 52/159 (32.70%), Postives = 84/159 (52.83%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++++A +LA YL+ + P L +I + + L EA++ D++I + N L G+ V KD C S S++L+N+ + AT V+ + + + +G+TN+DEF MGST E+S + T NPW+ VP R +LGSDTG Sbjct: 16 KQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQG-NASALTGIPVAYKDIFCQTGWRSACASKMLDNFISSYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGATKNPWNPEHVPGGSSGGSAAVVAARLAPAALGSDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chlorobium phaeobacteroides (strain DSM 266) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20 Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + T ++ ++YL R+ L A+S+D + G L G+ + +KDNI T SR+LENY +DAT ++++ D + +GKTN+DEF MGS+ E+S+F ANP+D +RVP +V+LGSDTG Sbjct: 17 QTTCEEVTKSYLERIDRHCDDNIFLAVFHEQALSRARSLDRRFSEGGTPGLLFGMPMAIKDNISIKGARLTCASRILENYESVYDATVIERLLNEDAVFIGKTNMDEFAMGSSNENSAFGPVANPFDKTRVPGGSSGGSAAAVAAGLALVALGSDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BORPD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gatA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20 Identity = 55/158 (34.81%), Postives = 81/158 (51.27%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R+V+A +LA + L + A L +F+H+ ++ D GPLAGV + KD T +TAGS++LE Y PFDAT V++++ + +GK N DEF MGS E+S++ NPWD + VP R + G+DTG Sbjct: 23 RQVSARELARSALDAAQAAG-DLNTFLHIDPDLTLAQADAADAALAAGTAGPLAGVPIAHKDAFVTRGWRTTAGSKMLEGYASPFDATVVQRLQAAGAVSLGKLNCDEFAMGSANENSAYGPVRNPWDPNAVPGGSSGGSAAAVAARLVAAATGTDTG 179
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BORPE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella pertussis GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20 Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R+V+A +LA++ L + A L +F+H+ ++ L +A++ D + GPLAG+ + KD T +TAGS++L Y PFDAT V+++ E + +GK N DEF MGS E+S++ NPWD VP R + G+DTG Sbjct: 23 RQVSAVELAQSGLDAAQAASG-LNAFLHIDPDLTLAQARAADAALAAG-TAGPLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLAEAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTQAVPGGSSGGSAAAVAARLVAAATGTDTG 179 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |