FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ALHEH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=gatA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E ++ ++ E +L+R+ P + I + L A + D +I E GPL GV + KD CT + ++ GSR+L+N+ P+DAT V K+ + +++GK N+DEF MGS+ E+S + NPWD+ VP R + G+DTG Sbjct: 17 EFSSREVTEAFLARIDALNPVTNAVITPTPEQALAAADAADQRIAAGE-AGPLTGVPLVHKDIFCTQGVRTSCGSRMLDNFTAPYDATVVGKLADAGMVMLGKANMDEFAMGSSNETSYYGPVKNPWDLDAVPGGSSGGSAAAVAGRLAPAATGTDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BORPA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella parapertussis GN=gatA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19 Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R+V+A +LA++ L + A L +F+H+ ++ L +A++ D + GPLAG+ + KD T +TAGS++L Y PFDAT V+++ E + +GK N DEF MGS E+S++ NPWD VP R + G+DTG Sbjct: 23 RQVSAVELAQSGLDAAQAASG-LNAFLHIDPDLTLAQARAADAALAAG-TAGPLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLAEAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTRAVPGGSSGGSAAAVAARLVAAATGTDTG 179
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: QRSL1_MOUSE (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Mus musculus GN=Qrsl1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 51/131 (38.93%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISR 614 +VT T+L + LS +K + L ++I VS V LK+A+ + + K+ +++G L G+ V VKDN T + +T S +L+ Y PP++AT V+K+ + +++GKTNLDEF MGS + F NPW S+ Sbjct: 17 QVTPTELCKNCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQSLGDLDGIPVAVKDNFSTTGIETTCASNMLKGYVPPYNATVVQKLLDQGALLMGKTNLDEFAMGSGSTDGVFGPVRNPWTYSK 146
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BORBR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bordetella bronchiseptica GN=gatA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 56/159 (35.22%), Postives = 85/159 (53.46%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R+V+A +LA++ L + A L +F+H+ + L +A++ D + GPLAG+ + KD T +TAGS++L Y PFDAT V+++ E + +GK N DEF MGS E+S++ NPWD VP R + G+DTG Sbjct: 23 RQVSAVELAQSGLDAAQAASG-LNAFLHIDPELTLAQARAADAALAAG-TAGPLAGIPIAHKDAFVTRGWRTTAGSKMLAGYASPFDATVVERLAEAGAVSLGKLNCDEFAMGSGNENSAYGPVRNPWDTRAVPGGSSGGSAAAVAARLVAAATGTDTG 179
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_NITEC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Nitrosomonas eutropha (strain C91) GN=gatA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19 Identity = 52/159 (32.70%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +++++T+L +L+R+K P L +FI + L +A++ D+ I ++ L G+ + KD C +T GS++L N+ P+DAT VK+ + + +GKTN+DEF MGS+ E+S + NPWD VP R + G+DTG Sbjct: 16 KKISSTELTGEFLARIKALNPDLNAFITMDEEKSLDQARTADEMIATGQST-LLTGIPIAQKDIFCANGWLTTCGSKMLSNFISPYDATVVKQFDQVGMVNLGKTNMDEFAMGSSNETSYYGPVKNPWDRLAVPGGSSGGSACAVAARLAPAATGTDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METHJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=gatA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19 Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 3 Query: 372 GPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 GPL+GV V VKDNI T + +T S++L+ Y PP+DA V +K +VGKTN+DEFGMG+TTE+S++ T NP D RVP ++GSDTG Sbjct: 27 GPLSGVTVAVKDNISTKGIETTCASKILKGYIPPYDAHVVTLLKNAGAAIVGKTNMDEFGMGTTTENSAYGPTLNPLDHQRVPGGSSGGSAAAVAAGLVDCAIGSDTG 134
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_VESOH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=gatA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19 Identity = 52/159 (32.70%), Postives = 90/159 (56.60%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ + +L + YLSR+ + +L +FI V++ + L +AQ DDKI N L G+ KD CT + ++AGS++L+ + P+DAT +K+ + + +++GKTN+DEF MGS+ E+S + NPW+ ++P + G+DTG Sbjct: 16 KDFSCVELTQYYLSRIN--QSKLNAFITVTDELALVQAQVADDKIALG-NASILTGIPYAHKDIFCTKGVKTSAGSKMLDTFIAPYDATVSQKLNQMNLVMLGKTNMDEFAMGSSNENSFYNAVKNPWNYLKIPGGSSGGSAASVAGGLSCFATGTDTG 171
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHOFD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=gatA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19 Identity = 59/161 (36.65%), Postives = 86/161 (53.42%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNEN--VGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R+V+A + A+ +L+R + A L +F+ + V L++A++ D + + L GV + KD T D STAGSR+L YR PFDAT V K+ + +GK N DEF MGS E+S+F NPWD++R P R + G+DTG Sbjct: 22 RKVSALETAQHFLARAQ-ANASLGAFLDFNEEVTLRQARAADLALAADSGGATPTLLGVPMAHKDIFVTRDFISTAGSRMLAGYRSPFDATVVSKLAAQGVVTLGKLNCDEFAMGSANENSAFGPVRNPWDLTRTPGGSSGGSAAAVAARLLPAATGTDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SALRD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Salinibacter ruber (strain DSM 13855) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E + L ++L R+ + ++ +F V + L A+ +D + +R N PLAG+++ VKDNIC P + GS++L ++ +DAT + ++++ I +GKTN DEF MGS+ E+S F NP VP C +LGSDTG Sbjct: 17 ETSCEALVSSFLERIDARDNEINAFTSVDQDGALNHARYLDSQRERG-NPRPLAGLVLAVKDNICIRGYPVSCGSKMLADFSSLYDATVIDRLRDAGAIFIGKTNCDEFAMGSSNETSHFGPVRNPHAPEYVPGGSSGGSAAAVAAGLCHAALGSDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_PSYCK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter cryohalolentis (strain K5) GN=gatA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 53/159 (33.33%), Postives = 85/159 (53.46%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFI-HVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ ++ +L + Y+ R+ + ++ SFI H S +A++ D+ + + PL GV + KD CT + +T GS++L N+ P+DAT V + + I +GK N+DEF MGS ESS + NPW+I+ VP V+ GSDTG Sbjct: 19 KQFSSLELTDHYIKRINALDSKINSFITHTSETARAQAKAADEMRVQGDK-RPLLGVPMAHKDIFCTQGVLTTCGSKMLHNFISPYDATIVTNIDKAGMISLGKLNMDEFAMGSDNESSYYGAVHNPWNIAHVPGGSSGGSAAAVAAGFVPVATGSDTG 176 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |