FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_MARAV (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 54/161 (33.54%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 228 VTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDIS----RVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +++ +L + +L RLK + + SFI +S+ L EA++ D+ ++ GV KD CT + ++ GS++L+N+ PP+DAT K + +GKTN+DEF MGS+ ESS + NPW +S RVP R + G+DTG Sbjct: 18 ISSVELTQQFLDRLKTEDGKYNSFITISDEQALAEARAADE-MRAAGKATVWTGVPFAHKDIFCTSGIRTSCGSKMLDNFVPPYDATVTANFKAAGAVCLGKTNMDEFAMGSSNESSFYGAVTNPWGLSGGDKRVPGGSSGGSAAAVAARLVPAATGTDTG 177
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_MACCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Macrococcus caseolyticus (strain JCSC5402) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 52/159 (32.70%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + + ++L E ++ + + SF+ + L++A+++D++ G L G+ +G+KDNI T D+ +T S++LE + +DAT + K+ +GI+VGK N+DEF MG +TE+S ++ T NP+D VP SLGSDTG Sbjct: 18 KTIRPSELIEDTFVNIEKDDTVINSFLALDKEAALEKAKTMDNETPS----GKLFGIPMGIKDNIVTKDVETTCASKILEGFNSVYDATVMNKLNAENGILVGKLNMDEFAMGGSTENSFYKKTVNPFDHKAVPGGSSGGSAAAVAASLVPFSLGSDTG 172
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BRAHW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=gatA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.286e-19 Identity = 50/162 (30.86%), Postives = 92/162 (56.79%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLK---LAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E+ A L ++ + ++ + ++ +++ + L++A+ ++I E++ PL GV + +KDN+C D TA S++LE Y+ P+ A V+++ + I++G+TN+DEF MG TTE+S++ VT NP + + VP +LGSDTG Sbjct: 18 KEIDAPTLVDSIIKNIEEDNKRDDKIYAYLEIFKEEALEQAKKAQERINNGEDL-PLLGVPLAIKDNLCYKDHLMTASSKMLEGYKAPYTAPTVQRLIDNGAIIIGRTNMDEFAMGGTTETSNYGVTRNPKNRAHVPGGSSGGSAAAVAANFAFGALGSDTG 178
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: QRSL1_RAT (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Rattus norvegicus GN=Qrsl1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18 Identity = 49/130 (37.69%), Postives = 80/130 (61.54%), Query Frame = 3 Query: 228 VTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISR 614 +T T+L + LS +K + L ++I VS V LK+A+ + + K+ +++G L G+ V VKDN T + +T S +L+ Y PP++AT V+++ + +++GKTNLDEF MGS + F NPW S+ Sbjct: 18 ITPTELCKKCLSLIKKTK-YLNAYITVSEEVALKQAEESEKRYKQGQSLGDLDGIPVAVKDNFSTSGIETTCASNMLKGYLPPYNATVVQRLLDQGALLMGKTNLDEFAMGSGSTDGVFGPVKNPWTYSK 146
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_AZOVD (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 52/159 (32.70%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E ++ +L+E L+R+ +P L SFI V+ L++A++ D + E+ G L G + KD CT + ++ S++L+++ P+DAT V+++ + +GK N+DEF MGS +ESS + NPW+ VP R + GSDTG Sbjct: 16 KEFSSVELSEALLARIAELDPGLNSFITVTAEQALEQARAADARRAAGES-GALLGAPIAHKDLFCTKGVRTSCASKILDDFIAPYDATVVERLAAAGCVSLGKLNMDEFAMGSASESSHYGPVRNPWNTECVPGGSSGGSAAAVAARLVPAATGSDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ACIC5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=gatA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 345 DKIKRNENVG-PLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 D + R E P+ GV G+KD + MP+TA S++LE YRPP+ ATAV+++ + ++VGK N DEF MGS+ E+S++ NP + RVP V +LG+DTG Sbjct: 57 DALSREERAKLPMGGVPFGIKDVLTVEGMPATASSKILEGYRPPYTATAVQRLIDAGAVLVGKLNCDEFAMGSSNENSAYGPVKNPRALDRVPGGSSGGSAAAVAANMAVATLGTDTG 174
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_JANSC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Jannaschia sp. (strain CCS1) GN=gatA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.149e-18 Identity = 51/163 (31.29%), Postives = 90/163 (55.21%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 EVT+ L + LS + A+ L +F+H + ++ L+ A++ D +I + + G+ VG+KD CT +PS A SR+L+ ++P +++T K+++ +++GK N+DEF MGS+ E+S + NPW D + P C+ + G+DTG Sbjct: 20 EVTSVDLTQACLSAIDQADA-LGTFVHKTPDLALERAKAADARIAEGD-APDMCGIPVGIKDLFCTEGVPSQAASRILDGFKPEYESTVSGKLRDAGAVMLGKLNMDEFAMGSSNETSVYGNAVNPWRAGNSDAALTPGGSSGGSASAVAGDLCLAATGTDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: QRSL1_XENLA (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Xenopus laevis GN=qrsl1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISR 614 +V T+L + LS +K L ++I ++ ++ LK+A D + + + +G L G+ + +KDN T + +T SR+L+ Y P++AT V+K+ + +++GKTNLDEFGMGS + S F NPW SR Sbjct: 17 QVKPTELCQKCLSLIKETS-FLNAYITITEDIALKQAAEADKRFAQGKPLGELDGIPIAIKDNFSTAGIETTCASRMLKGYVAPYNATVVQKLFDQGAVLMGKTNLDEFGMGSGSTDSIFGPVRNPWSYSR 146
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_TERTT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E ++ ++ +L R+K +P ++ V+ + + +A++ D ++ N + GV KD CT + +T GS++L+N+ PP++AT V+ +++GKTN+DEF MGS+ E+S F NPWD + VP R + +DTG Sbjct: 16 KEFSSEEITRYFLDRIKQQDPTYNCYVTVTEELAMAQAKAADARLAAG-NAPTMCGVPFAHKDIFCTNGVKTTCGSKMLDNFVPPYNATVVENYINEGAVMLGKTNMDEFAMGSSNETSYFGPVKNPWDTNCVPGGSSGGSAAAVAARMAPGATATDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METJA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanocaldococcus jannaschii GN=gatA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 55/152 (36.18%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 249 ETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSI--DDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E YL R++ + + I V VL+EA+ + D+K K+ PL G ++ VK NI + S+ LENY P+DAT ++K+KE G+++G N+DEF GS+ E+S F T NP R+P C ++LGSDTG Sbjct: 7 EEYLDRIEKINKDINALIEVKPEKVLEEAKKLEKDEKAKKK----PLYGKIIVVKANINVEGYTISCASKTLENYIAPYDATVIEKIKENGGLIIGIANMDEFACGSSGETSYFGPTKNPRAKDRIPGGSSSGSAAAVSADLCDMALGSDTG 154 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |