FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHLT3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=gatA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.015e-18 Identity = 53/159 (33.33%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHV-SNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++V+ + YL+R++ + +L +FI V L A+++D K+ G L G+ + +K+NI T GS++L + +DATA+KK+ D + +G N+DEF MGS+TE+S F T N D ++VP +V+LGSDTG Sbjct: 19 KKVSCEAVTAAYLNRIE-EKKELNAFIAVFKETALARAKALDAKLADGNAPGKLFGLPMAIKNNIAIEGERLTCGSKILSKFNSIYDATAIKKLLAEDAVFLGSANMDEFAMGSSTETSYFGATKNSVDPTKVPGGSSGGSAVAVASDCALVALGSDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_GRABC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 46/163 (28.22%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + +A +L + +L ++ P+L ++I V+ + + + D++ + G L G+ V KD C+ + +TAGSR+LEN+ PP+++ +++ +++GK NLDEF MGS +S++ NPW D VP + + G+DTG Sbjct: 19 KRFSARELTDAHLGAIEALNPRLNAYITVTPDQARAQAAAADRVLASGEAGALTGIPVASKDMFCSEGIRTTAGSRILENFVPPYESAVTERMLRDGAVILGKANLDEFAMGSANLTSAYGPVENPWKRHDDDAVLVPGGSSGGSAAAVAAHLALGATGTDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_EHRCR (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia chaffeensis (strain Arkansas) GN=gatA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 53/164 (32.32%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKI--KRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE +A +L + ++ + +L +FI + + A D I + EN+ PL G+ VG+KD CT + +TA S +L+N+ P +D+T K++ + +++GK N+DEF MGS+ +S F NPW + VP C +LGSDTG Sbjct: 19 REFSAVELTKLHIEAVN--NEKLNAFITKTPEIALSAAEKADYIFTHQKENLTPLTGIPVGIKDLFCTKHVRTTACSNILKNFTPQYDSTVTKRLLDNGAVMLGKLNMDEFAMGSSNSNSCFGHVKNPWVRADGVEVVPGGSSGGSSAAVAGFLCAGALGSDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SACD2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gatA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 48/159 (30.19%), Postives = 86/159 (54.09%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + ++ ++ + +L+R+K + + SFI ++ L +A + D ++ + L GV + KD CT + ++ GS++L+N+ PP+DAT V + +++GKTN+DEF MGS+ E+S + NPWD + VP R + +DTG Sbjct: 16 KSFSSVEITQHFLNRIKTLDTEYNSFITLTEEQALAQATAADARLAAGD-APALCGVPLAHKDIFCTNGVRTSCGSKMLDNFVPPYDATVVTNYSQDGVVILGKTNMDEFAMGSSNETSYYGPVKNPWDTNCVPGGSSGGSAAAVAARLVPGATATDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ORITB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Orientia tsutsugamushi (strain Boryong) GN=gatA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E TAT L +++++ + S+I + +A D + +N P+ G+ V +KD CT + +TA S++L+N+ P +DATA K+ GI++GK N+DEF MGS +S F NPW D+ P + +LGSDTG Sbjct: 19 KEFTATDLVTAHINQMDKYR-YINSYITEIPELALQAAKKSDFLIQNNQARPIEGIPVSIKDLFCTKGILTTAASKMLQNFTPVYDATAYSKIINAGGIMLGKGNMDEFAMGSANINSYFGNVINPWKAESDDVDLTPGGSSGGSSAAVAAFMAMAALGSDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_AKKM8 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gatA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 43/107 (40.19%), Postives = 65/107 (60.75%), Query Frame = 3 Query: 375 PLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 PLAG+ + VKDNI + P+ SR+L Y P+DAT+++ +KE GI +G+TN+DEF MG++ E+S++ +T NP R+P + +LGSDTG Sbjct: 62 PLAGIPIAVKDNINVLGQPTRCASRLLSPYVAPYDATSIRLLKEAGGIPLGRTNMDEFAMGASGENSAYGITRNPEAPDRIPGGSSSGSAAAVASATAIAALGSDTG 168
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_EHRRG (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia ruminantium (strain Gardel) GN=gatA PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNEN--VGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E +A +L + ++ + QL +FI + V A D I +E + L G+ VG+KD CT ++ +TA S +L N+ P +D+T VK++ + +++GK N+DEF MGS+ +S F NPW + VP C +LGSDTG Sbjct: 19 KEFSAVELTQAHIDAIN--NEQLNAFITKTPEVALNAARKADHILTHEQDKITSLTGIPVGIKDLFCTKNIKTTACSNILRNFTPQYDSTVVKRLIDDGAVMLGKLNMDEFAMGSSNSNSCFGPVENPWTRADGVKVVPGGSSGGSSAAVAGFLCAGALGSDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_DICDI (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Dictyostelium discoideum GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 56/165 (33.94%), Postives = 81/165 (49.09%), Query Frame = 3 Query: 270 KLAEPQLKSFIHVSNNVLKEAQSIDDKIKR------NENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----------------DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 K++ L +FI L++ +S+ +IK N L G+ +GVKDN + + +T GS++LENY P FD+T VK +KE I++GKTN+DEF MGS++ S F NPW ++ V CV S+GSDTG Sbjct: 34 KVSPNHLNTFIS-----LQDEKSLGKQIKESQERYDNGTNKRLDGIPIGVKDNFSSKNFKTTCGSKILENYIPSFDSTVVKLLKEEGAIIIGKTNMDEFSMGSSSTSGHFGKVINPWSKPNNNNNNDNDNNNNGEVLYVAGGSSGGSAAAVASNYCVASIGSDTG 193
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CHRVO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Chromobacterium violaceum GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 48/159 (30.19%), Postives = 83/159 (52.20%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++V++ +LA YL R++ PQL + + V L EA++ D ++ + L GV + KD C ++ GSR+L+N+ P+ A V++ + +G+ N+DEF MGS+ E+S + NPWD++ +P R V+ +DTG Sbjct: 16 KQVSSVELASQYLDRIEALNPQLNAIVTVDREKTLAEARAADARLAAGD-ARALTGVPLVHKDLFCQQGWKTSCGSRMLDNFVSPYSAHVVEQCAAAGMVTLGRANMDEFAMGSSNENSFYGAVKNPWDLNAIPGGSSGGSAAAVAARLAPVATATDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BARQU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bartonella quintana GN=gatA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 50/164 (30.49%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE AT+L E YL ++LA P L +++ ++ +K A D ++ R + G L G+ +G+KD T + + A S +L+ ++PP+++T + I++GK N+DEF MGS+ E+S + NPW + VP + C + +DTG Sbjct: 19 REFKATELTEAYLKAIELANPTLNTYVAITAEQAMKMATESDSRLARGQG-GILEGIPLGIKDLFATQGVHTQACSYILDGFKPPYESTVTANLWRDGAIMLGKLNMDEFAMGSSNETSYYGPVINPWRKKGSNEKLVPGGSSGGSAAAVAAQLCAGATATDTG 181 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |