FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: QRSL1_XENTR (Glutamyl-tRNA(Gln) amidotransferase subunit A homolog OS=Xenopus tropicalis GN=qrsl1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 47/131 (35.88%), Postives = 77/131 (58.78%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNN-VLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISR 614 ++ T+L + LS +K L ++I V+ + LK+A D++ + + +G L G+ + +KDN T + +T SR+L+ Y P++AT V+K+ + + +GKTNLDEF MGS + S F NPW SR Sbjct: 17 QIKPTELCQKCLSFIKETS-FLNAYITVTEDFALKQAAEADERFIQGKPLGDLDGIPIAIKDNFSTAGIETTCASRMLKGYIAPYNATVVQKLFDQGAVFMGKTNLDEFAMGSGSTDSIFGPVKNPWSYSR 146
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ANAMM (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaplasma marginale (strain St. Maries) GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISR----VPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ +A +L E Y+ ++ + L +F+ + + L A D ++R E + P++G+ VGVKD CT + +TA S +L+N+ P +++T +K+ + +++GK N+DEF MGS+ S F NPW + P C +LGSDTG Sbjct: 20 KDFSARELTEAYIGAVE--QDTLNAFVTTTPELALAAADRTDGLLQRGEPIHPMSGIPVGVKDLFCTKGVRTTACSNILKNFVPTYESTVSQKLWDSGAVMLGKLNMDEFAMGSSNTYSCFGPVKNPWKGTEGKDLTPGGSSGGSSAAVAGLLCAGALGSDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ANAMF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaplasma marginale (strain Florida) GN=gatA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 50/163 (30.67%), Postives = 86/163 (52.76%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISR----VPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ +A +L E Y+ ++ + L +F+ + + L A D ++R E + P++G+ VGVKD CT + +TA S +L+N+ P +++T +K+ + +++GK N+DEF MGS+ S F NPW + P C +LGSDTG Sbjct: 20 KDFSARELTEAYIGAVE--QDTLNAFVTTTPELALAAADRTDGLLQRGEPIHPMSGIPVGVKDLFCTKGVRTTACSNILKNFVPTYESTVSQKLWDSGAVMLGKLNMDEFAMGSSNTYSCFGPVKNPWKGTEGKDLTPGGSSGGSSAAVAGLLCAGALGSDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METM7 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=gatA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 3 Query: 270 KLAEPQLKSFIHV-SNNVLKEAQSID--DKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 K+ + + +FI V S VLKEA+ ++ D +K PL G +V VK NI + S+ L+NY +DAT VKK++ ++VG TN+DEF GS+ E+S F T NP + R+P C +++GSDTG Sbjct: 12 KIEKSDVNAFIDVNSEKVLKEAEELEKNDALKNK----PLYGKIVAVKSNINVKGYKISCASKTLDNYIGTYDATVVKKLRSQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTG 152
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_DINSH (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Dinoroseobacter shibae (strain DFL 12) GN=gatA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 48/164 (29.27%), Postives = 90/164 (54.88%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLK-EAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE+TAT+L E L+ ++ A L +F+H + ++ + +A++ D ++ + + G+ +G+KD CT +PS A S +L ++P +++T ++ +++GK N+DEF MGS+ E+S++ NPW D + P C+ + G+DTG Sbjct: 19 REITATELTEACLAEVEGAGA-LGAFVHNTPDLARAQAEAADARLAAGD-APAMCGIPLGIKDLFCTKGVPSQAASAILGGFKPEYESTVTSQLFAAGAVMLGKLNMDEFAMGSSNETSTYGNAVNPWRRGNEDTALTPGGSSGGSASAVAADLCLAATGTDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_AGRVS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=gatA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/163 (26.99%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +++TA +L + YL ++ A + +++ V+ + ++ D G L G+ +GVKD T D+ + A S +L+ ++P +++T + + +++GK N+DEF MGS+ E+S + NPW + VP R C + SDTG Sbjct: 19 KDITAVELTDAYLGAIEAANGAINAYVTVTPEIARDMAKASDARLATGKAGALEGIPLGVKDLFATRDVHTQACSNILDGFKPKYESTVTQNLWNEGAVMLGKLNMDEFAMGSSNENSFYGPVVNPWRATGSEEKLVPGGSSGGSAAAVAARLCAGATASDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_WOLPP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=gatA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDK--IKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R +A +L ET+++ ++ QL +FI + + +A I D+ +K+ +++ PL G+ VGVKD CT + +TA S++LEN+ P +++T + + V+GK N+DEF MGS +S F N W VP C +LGSDTG Sbjct: 19 RNFSAVELVETHINAVE--NEQLNAFITKTPEIAIKAAKIADEHFLKQKDDIPPLMGIPVGVKDLFCTKGIKTTACSKMLENFIPTYESTVSNLLLKSGAAVLGKLNMDEFAMGSANTNSYFGPVENVWIRKSDGAKVVPGGSSGGSAASVAGFLCAGALGSDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHOS4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gatA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 49/161 (30.43%), Postives = 83/161 (51.55%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW---DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E++A L L+ + P L +F+H + + L +A++ D +R G L G+ +G+KD CT + S A S +L+ ++P +++T K+ E +++GK N+DEF MGS+ E+S + NPW D P C+ + G+DTG Sbjct: 19 ELSAVDLTMACLTAIDAGTP-LNAFVHATPEIALDQARAAD--ARRGAGAGALNGIPLGIKDLFCTRGVASQAASNILKGFKPEYESTVTSKLFEAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CAMFF (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=gatA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 51/142 (35.92%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 309 SNNVLKEAQSIDDKIKRNENVGPL-------------AGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 S++++K +++ DKIK N +G AGV + +KDNI + T+ S++L+ Y P+ AT V+K+ + G+TN+DEF MGSTTESS + T NP D +RVP + +LGSDTG Sbjct: 12 SSDIVKLRKNLKDKIKDNRQLGAYIEQLTNSDISDEYAGVPIAIKDNIQVKNWSITSCSKILQGYVAPYHATVVEKLLKAGLAPFGRTNMDEFAMGSTTESSFYGKTLNPLDHTRVPGGSSGGSAAAVSAGLAIAALGSDTG 153
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BORGA (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Borrelia garinii GN=gatA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.323e-16 Identity = 52/137 (37.96%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 288 LKSFIHVSNNVLKEAQSIDDKIKRNENVG-PLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + +I ++ L A+ DD +K E PL G+ + VKDNI D T S +L+ Y P+DAT +K++K I++GKTN+DEF MGST E S + T NP + V Q SLGSDTG Sbjct: 39 INGYIEFFDDSLDIAKRYDDCLKNCELEDLPLIGMPIAVKDNISIQDKSLTCASEILKGYISPYDATVIKRLKNKGAILIGKTNMDEFAMGSTGEFSCYGATLNPLNREYVIGGSSGGSAAVVASFQAPFSLGSDTG 175 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |