FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHOSK (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=gatA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW---DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E++A L L+ + P L +F+H + + L +A++ D +R G L G+ +G+KD CT + S A S +L ++P +++T K+ E +++GK N+DEF MGS+ E+S + NPW D P C+ + G+DTG Sbjct: 19 ELSAVDLTMACLTAIDAGTP-LNAFVHATPEIALDQARAAD--ARRGAEAGALNGIPLGIKDLFCTRGVASQAASNILRGFKPEYESTVTSKLFEAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHOS1 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gatA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 49/161 (30.43%), Postives = 82/161 (50.93%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW---DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E++A L L+ + P L +F+H + + L +A++ D +R G L G+ +G+KD CT + S A S +L ++P +++T K+ E +++GK N+DEF MGS+ E+S + NPW D P C+ + G+DTG Sbjct: 19 ELSAVDLTMACLTAIDAGTP-LNAFVHTTPEIALDQARAAD--ARRGAGAGALNGIPLGIKDLFCTRGVASQAASNILRGFKPEYESTVTSKLFEAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRRLTPGGSSGGSAAAVAADLCLAATGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHORT (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=gatA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 48/160 (30.00%), Postives = 84/160 (52.50%), Query Frame = 3 Query: 231 TATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 T +L +L+R++ A L +FI + ++ + + R GP+ G+ +G+KD CT + +TAGS++L+ + PP+++T + + +++GKTNLDEF MGS+ ++S+ NPW D VP R + + G+DTG Sbjct: 25 TPLELTNAHLARME-AGRGLNAFITETPDLARMQAERSGERLRAGKAGPMEGIPIGIKDLFCTEGVRTTAGSKILDGFVPPYESTVSANLAKAGAVMLGKTNLDEFAMGSSNKTSASGPVINPWTRTDDDEQLVPGGSSGGSAAAVAGRLAMAATGTDTG 183
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHOPS (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodopseudomonas palustris (strain BisB5) GN=gatA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + TA +L E +L+ ++ A + K AQ+ D +I + GPLAG+ +G+KD T D +TA S++L ++ PP+++T ++ ++VGK N DEF MGS+ E+S F NPW + VP C+ + +DTG Sbjct: 19 KSFTALELTEAHLTAIEAARGLNAFVLETPEQARKMAQAADAQIATGDG-GPLAGIPLGIKDLFATKDTRTTACSKILGDFHPPYESTVTTQLWRDGAVMVGKLNNDEFAMGSSNETSCFGPVVNPWRRAGSETKLVPGGSSGGSAAAVAAGLCLGATATDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHILO (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhizobium loti GN=gatA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 44/133 (33.08%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRV 617 +E+TAT++ E YLS + A P L +++ V+ + ++ A++ D ++ + E G L G+ +G+KD T + + A S VL+ ++P +++T + +++GK N+DEF MGS+ E+S + NPW SR+ Sbjct: 19 KEITATEITEAYLSAIDRANPALNAYVAVTGDRARDMAKASDARLVKGEG-GALEGIPLGIKDLFGTEGVHTQACSHVLDGFKPLYESTVTANLWADGAVMLGKLNMDEFAMGSSNETSYYGPVINPWRRSRL 150
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_ORITI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Orientia tsutsugamushi (strain Ikeda) GN=gatA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E TAT L +++++ + L+ A+ D I+ N+ P+ G+ V +KD CT + +TA S++L+N+ P +DAT K+ GI++GK N+DEF MGS +S F NPW DI P + +LGSDTG Sbjct: 19 KEFTATDLVTAHINQMDKYRCINAYITEIPELALQAAKKSDFLIQTNQ-ARPIEGIPVSIKDLFCTKGILTTAASKMLQNFTPVYDATVYSKIINAGGIMLGKGNMDEFAMGSANINSYFGNVINPWKAENDDIDLTPGGSSGGSSAAVAAFMAMAALGSDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METSB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=gatA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFI-HVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ +A +L + L+ ++ A L +FI L A++ D +I R E GPL GV +G+KD CT + +TA S +LE ++P +++T + +++GK NLDEF MGS+ E+S F +PW D VP R C + +DTG Sbjct: 19 KDFSAVELVKAQLAEIEQARA-LNAFIKETPEKALAMAEASDARIARGE-AGPLEGVPLGIKDLYCTEGVETTAASHILEGFKPAYESTVSANLWRDGAVMLGKLNLDEFAMGSSNETSYFGPVVSPWRRKGSDARIVPGGSSGGSAAAVAARLCFGATATDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_EHRCJ (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ehrlichia canis (strain Jake) GN=gatA PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.728e-16 Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKI--KRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE +A +L + ++ + +L +F+ + + A D I + EN+ PL G+ VG+KD CT ++ +TA S +L+N+ P +D+T K + +++GK N+DEF MGS+ +S F NPW VP C +LGSDTG Sbjct: 19 REFSAVELTKLHIEAVD--NEKLNAFVTKTPEIALSAAEKADHIFTHQQENLTPLTGIPVGIKDLFCTKNVRTTACSNILKNFIPQYDSTVTKLLLNNGAVMLGKLNMDEFAMGSSNSNSCFGNVKNPWIRADGAEVVPGGSSGGSSAAVAGFLCAGALGSDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHOS5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gatA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16 Identity = 49/161 (30.43%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 225 EVTATQLAETYLSRLKLAEPQLKSFIHVSNNV-LKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW---DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 E++A L L+ + P L +F+H++ + L +A++ D +R E G L G+ +G+KD CT + S A S +L+ ++P +++T K+ +++GK N+DEF MGS+ E+S + NPW D P C+ + G+DTG Sbjct: 19 ELSAVDLTMACLTAIDAGTP-LNAFVHLTPEIALDQARASD--ARRGEGAGALNGIPLGIKDLFCTRGVASQAASNILKGFKPEYESTVTSKLFAAGAVMLGKLNMDEFAMGSSNETSCYGDAVNPWKVDDRKLTPGGSSGGSAAAVAADLCLGATGTDTG 176
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: AMI4_MYCTU (Putative amidase amiD OS=Mycobacterium tuberculosis GN=amiD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16 Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R++T+ ++ E+ L R++ +PQLKS+ V L A++ D I R G L GV +GVKD TVD P+ AG+ + ++RP +DAT V +++ +++GK + E S NPWD + C S+GSDTG Sbjct: 32 RQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAADADIARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKLAMTEGAY--LGYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGSIGSDTG 188 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |