FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: AMI4_MYCBO (Putative amidase amiD OS=Mycobacterium bovis GN=amiD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16 Identity = 51/159 (32.08%), Postives = 79/159 (49.69%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 R++T+ ++ E+ L R++ +PQLKS+ V L A++ D I R G L GV +GVKD TVD P+ AG+ + ++RP +DAT V +++ +++GK + E S NPWD + C S+GSDTG Sbjct: 32 RQLTSAEVTESTLRRIERLDPQLKSYAFVMPETALAAARAADADIARGHYEGVLHGVPIGVKDLCYTVDAPTAAGTTIFRDFRPAYDATVVARLRAAGAVIIGKLAMTEGAY--LGYHPSLPTPVNPWDPTAWAGVSSSGCGVATAAGLCFGSIGSDTG 188
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHILW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=gatA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 41/128 (32.03%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLK-EAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW 602 +E+TA +L E Y+S + A L ++I V+ ++ + A++ D++I + G L G+ +G+KD TV + + A S +L+ + P +++T + + + +++GK N+DEF MGS+ E+S + NPW Sbjct: 19 KEITALELTEAYISAIDAANGHLNAYIKVTPDLARLMAKNSDERIAAGK-AGDLEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLGKLNMDEFAMGSSNETSHYGAVINPW 145
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METM6 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=gatA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 53/145 (36.55%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 270 KLAEPQLKSFIHV-SNNVLKEAQSID--DKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 K+ + + +FI V S VLKEA+ ++ D +K PL G +V VK NI + S+ LE Y +DAT VKK++ ++VG TN+DEF GS+ E+S F T NP + R+P C +++GSDTG Sbjct: 12 KIEKSDVNAFIDVNSEKVLKEAEELEKNDYLKNK----PLYGKIVAVKSNINVKGYKISCASKTLEKYTGTYDATVVKKLRLQGALIVGMTNMDEFASGSSGETSYFGPTKNPAAMDRIPGGSSSGSAAAVAADLCDMAIGSDTG 152
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CELJU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Cellvibrio japonicus (strain Ueda107) GN=gatA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 45/158 (28.48%), Postives = 80/158 (50.63%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ ++T++ + YL R+ + S+I V+ +V + + DK N L GV + KD CT + ++ S++L+ + P++AT V+ + +++GKTN+DEF MGS+ E+S + NPW+ VP + SDTG Sbjct: 16 KDFSSTEITQHYLDRIARLDNTYNSYITVTGDVALQQAAAADKRLAAGNTSALCGVPIAHKDIFCTAGVRTSCASKMLDKFIAPYNATIVENYLKAGVVMLGKTNMDEFAMGSSNETSWYGPVKNPWNTHCVPGGSSGGSAAAVAAHLAPAATASDTG 173
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_SINMW (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sinorhizobium medicae (strain WSM419) GN=gatA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 45/163 (27.61%), Postives = 82/163 (50.31%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 +E+TA +L + YL+ ++ A + ++I V+ + +E D G L G+ +G+KD T + + A S +L+ +RP +++T + + +++GK N+DEF MGS+ E+S + NPW ++ VP R C + +DTG Sbjct: 19 KEITAVELTDAYLAAIEAANETINAYIAVTPDKAREMAKASDARIGAGKAGALEGIPLGIKDLFGTQGLHTQACSHILDGFRPHYESTVTQNLWNDGAVMLGKLNMDEFAMGSSNETSYYGPVKNPWRAKESNLDLVPGGSSGGSAAAVAARLCAGATATDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METPB (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=gatA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 47/163 (28.83%), Postives = 85/163 (52.15%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ +A ++A+ +L ++ A+ + + LK A D+KI + E PL G+ +G+KD T + +TAGS++LE + P +++ ++ +++GK NLDEF MGS+ E+S++ T +PW D VP C+ + +DTG Sbjct: 19 KDFSAREIAQAHLDAIERAKALNAYIVATPDRALKMADVSDEKIAKGE-ARPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHYESNVSSQLWRDGAVMLGKLNLDEFAMGSSNETSAYGKTISPWRRQGSDTPLVPGGSSGGSAAAVAAHLCLGATATDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METM5 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=gatA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 52/145 (35.86%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 270 KLAEPQLKSFIHV-SNNVLKEAQSID--DKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 K+ + + +FI V S VLKEA+ ++ D +K PL G +V VK NI + S+ LE Y +DAT VKK++ ++VG TN+DEF GS+ E+S + T NP + R+P C +++GSDTG Sbjct: 12 KIEKSDVNAFIDVNSEKVLKEAEELEKNDDLKNK----PLYGKIVAVKSNINVKGYKISCASKTLEKYVGTYDATVVKKLRSQGALIVGMTNMDEFAGGSSGETSCYGPTKNPAALDRIPGGSSSGSAAAVAADLCDMAIGSDTG 152
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_HELHP (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Helicobacter hepaticus GN=gatA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 52/145 (35.86%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 288 LKSFIHVSNNVLKEA-----QSIDDKIKRNENVGPL----AGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 LK ++ S N LKE Q + + I+ N +G + +GV + +KDNI T S++L+ Y P++A+ + K+ E G+ N+DEF MGSTTESS + NP D SRVP + SLGSDTG Sbjct: 4 LKEALNKSENELKEIKTLLRQRVKENIELNAYIGEINESGSGVPILIKDNINVKGWEITCASKILKGYVSPYNASVITKLHENKMCAFGRANMDEFAMGSTTESSCYGRVKNPLDTSRVPGGSSGGSAAAVAAGLAIASLGSDTG 148
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_CAMHC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=gatA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 288 LKSFIHVSNN-VLKEAQSIDDKIKRNENVGPL-------------AGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPWDISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 LK + +S + +L + + DKI + +++G +G+ + +KDNI + T+ S +L+ Y P+DAT + K++ G+TN+DEF MGSTTESS + T NP D SRVP V +LGSDTG Sbjct: 4 LKEALKLSKDEILALRKELKDKILKTKDLGAYIEQLTGEDLNESGSGIPIAIKDNIQVKNWSVTSASNILQGYVAPYDATVITKLRSAGFAPFGRTNMDEFAMGSTTESSFYGKTLNPTDYSRVPGGSSGGSAAAVAAGIAVAALGSDTG 153
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BARHE (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bartonella henselae GN=gatA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 48/164 (29.27%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVS-NNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 RE+ AT+L E YL ++LA P L +++ ++ +K A D ++ + G L G+ +G+KD T D+ + A S +L+ ++P +++T + +++GK N+DEF MGS+ E+S + +PW + VP CV + +DTG Sbjct: 19 RELKATELTEAYLKAIELANPILNTYVAITAEQAMKMAAKSDSRLAKGHG-GILEGIPLGIKDLFATQDVHTQACSYILDGFKPHYESTVTANLWRDGAVMLGKLNMDEFAMGSSNETSYYGPVISPWRKKDSNEKLVPGGSSGGSAAAVAAGLCVGATATDTG 181 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |