FC920234
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHIL3 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gatA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16 Identity = 41/128 (32.03%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW 602 +E+TA +L E Y+S + A +L ++I V+ ++ + A++ D++I + G L G+ +G+KD TV + + A S +L+ + P +++T + + + +++GK N+DEF MGS+ E+S + NPW Sbjct: 19 KEITAIELTEAYISAIDAANGRLNAYIKVTPDLARVMAKNSDERIAAGK-AGELEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLGKLNMDEFAMGSSNETSYYGPVINPW 145
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHOP2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodopseudomonas palustris (strain HaA2) GN=gatA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 47/163 (28.83%), Postives = 83/163 (50.92%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + TA +L + +L+ ++ A + + + AQ+ D +I + E GPLAG+ +G+KD T +TA S++L +++PP+++T ++ +++GK N DEF MGS+ E+S F NPW + VP C+ + +DTG Sbjct: 19 KSFTAVELTDAHLAAIEAARVLNAYVLETPDQARQMAQAADAQIAKGEG-GPLAGIPLGIKDLFATKGTRTTACSKILGDFKPPYESTVTSQLWRDGAVLLGKLNNDEFAMGSSNETSCFGPVVNPWRRAGSETKLVPGGSSGGSAAAVAAGLCLGATATDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_OCHA4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gatA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 46/164 (28.05%), Postives = 87/164 (53.05%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + +TAT+L + YLS + A + +++ V+++ + A++ D++I + E G L G+ +GVKD T + + A S +L+ ++P +++T + +++GK N+DEF MGS+ E+S + NPW + VP + C + +DTG Sbjct: 19 KAITATELTDAYLSAIDSANETINAYVKVTHDQARSMAKASDERIAKGE-AGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSNETSYYGSVKNPWRANGSNADLVPGGSSGGSAAAVAAQLCAGATATDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_METC4 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=gatA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 47/163 (28.83%), Postives = 84/163 (51.53%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++ +A ++A+ +L + A+ + + LK A+ D KI + E PL G+ +G+KD T + +TAGS++LE + P +++ ++ +++GK NLDEF MGS+ E+S++ T +PW D VP C+ + +DTG Sbjct: 19 KDFSAREIAQAHLDAIDRAKALNAYIVATPDRALKMAEVSDQKIAKGE-ARPLEGLPLGIKDLFATQGVHTTAGSKILEGFEPHYESNVSSQLWRDGAVMLGKLNLDEFAMGSSNETSAYGKTISPWRRQGSDAPLVPGGSSGGSAAAVAAHLCLGATATDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BEII9 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=gatA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16 Identity = 47/163 (28.83%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKEAQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 ++++A +LA ++ ++ A + A++ D+KI R E GPL G+ +G+KD CT + +TA S +LEN+ P ++++ + +++GK NLDEF MGS+ E+S F +PW P R C+ + +DTG Sbjct: 19 KKISAAELAMAHIEAVEKARALNAFLLETPERAQAMARASDEKIARGE-AGPLEGIPLGIKDLFCTEGVRTTAASHILENFVPAYESSITANLWRDGAVMLGKLNLDEFAMGSSNETSYFGPVVSPWRREGSTAPLTPGGSSGGSAAAVAARLCLGATATDTG 180
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_RHIEC (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gatA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 40/128 (31.25%), Postives = 77/128 (60.16%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW 602 +E+TA +L E Y+S + A +L +++ V+ ++ + A+ D++I G L G+ +G+KD TV + + A S +L+ + P +++T + + + +++GK N+DEF MGS+ E+S + NPW Sbjct: 19 KEITAIELTEAYISAIDAANERLNAYVKVTPDLARVMARKSDERIAAG-TAGELEGIPLGIKDLFATVGVHTQACSHILDGFEPRYESTVTQNLWDDGAVMLGKLNMDEFAMGSSNETSYYGPVINPW 145
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BRUSU (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella suis GN=gatA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 46/164 (28.05%), Postives = 86/164 (52.44%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + +TAT+L + YLS + A + +++ V+++ + A++ D++I + E G L G+ +GVKD T + + A S +L+ ++P +++T + +++GK N+DEF MGS+ E+S + NPW + VP C + +DTG Sbjct: 19 KAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAKGE-AGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BRUSI (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gatA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 46/164 (28.05%), Postives = 86/164 (52.44%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + +TAT+L + YLS + A + +++ V+++ + A++ D++I + E G L G+ +GVKD T + + A S +L+ ++P +++T + +++GK N+DEF MGS+ E+S + NPW + VP C + +DTG Sbjct: 19 KAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAKGE-AGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BRUO2 (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gatA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 46/164 (28.05%), Postives = 86/164 (52.44%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + +TAT+L + YLS + A + +++ V+++ + A++ D++I + E G L G+ +GVKD T + + A S +L+ ++P +++T + +++GK N+DEF MGS+ E+S + NPW + VP C + +DTG Sbjct: 19 KAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAKGE-AGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTG 181
BLAST of FC920234 vs. ExPASy Swiss-Prot
Match: GATA_BRUME (Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brucella melitensis GN=gatA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 46/164 (28.05%), Postives = 86/164 (52.44%), Query Frame = 3 Query: 222 REVTATQLAETYLSRLKLAEPQLKSFIHVSNNVLKE-AQSIDDKIKRNENVGPLAGVLVGVKDNICTVDMPSTAGSRVLENYRPPFDATAVKKVKEFDGIVVGKTNLDEFGMGSTTESSSFQVTANPW-----DISRVPXXXXXXXXXXXXXRQCVVSLGSDTG 695 + +TAT+L + YLS + A + +++ V+++ + A++ D++I + E G L G+ +GVKD T + + A S +L+ ++P +++T + +++GK N+DEF MGS+ E+S + NPW + VP C + +DTG Sbjct: 19 KAITATELTDAYLSAIDAANDAINAYVAVTHDQARSMAKASDERIAKGE-AGALEGIPLGVKDLFATKGVHTQACSHILDGFKPEYESTVTANLWADGAVMLGKLNMDEFAMGSSNETSYYGPVKNPWRAKGSNADLVPGGSSGGSAAAVAAHLCAGATATDTG 181 The following BLAST results are available for this feature:
BLAST of FC920234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920234 ID=FC920234; Name=FC920234; organism=Citrus clementina; type=EST; length=697bpback to top |