FC920236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 206 RLMFENSCEVGVFSKLTNAYCLVAIG-GSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGS 646 +L + +GV+ +++Y L G++ + E + VV+ + G R++G L GN G+LLP D+E++ +R +L + V V + R +ALGN I CND L L++E + ++D LGVEV ++AG VGS Sbjct: 11 KLSLYGNPNIGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVLTTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGS 156
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 48/150 (32.00%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGS 646 M + + + +GV + +V+ G +S+ + + L P++KT I G+ + G L AGN NGLL+ EL LR + V+ + ++L+A+GN I ND+ AL + L E + +I + L VEV +IAG +VGS Sbjct: 1 MIQKFDIDGNPNLGVSILAKDNVAIVSPGLQDSYLKSIKETLN--VPIIKTPICGSNLAGALMAGNSNGLLISPYVFSHELDVLREH---DINVEIMPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGS 145
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 52/139 (37.41%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNI-LVGS 646 +GV+ N LV +E E L V++T I I G + AGN NGLLLP +EL +LR + D+V ++ +E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNGLLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGS 149
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_THEPD (Translation initiation factor 6 OS=Thermofilum pendens (strain Hrk 5) GN=eif6 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 45/139 (32.37%), Postives = 70/139 (50.36%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELA-DVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGS 646 +GV+ + + L+ E L+ D F V S+ GTR++G AGN NGL++P D EL+HL++ L +VV + R + +GN + ND+ + L + + IAD LGVE + +I VGS Sbjct: 15 IGVYIFANDRFALIPYDAPEKLDRKIAENLSVDAFRV---SVAGTRLVGIFLAGNNNGLVVPRVILDSELEHLKSLLDVNIVVLE-DVRETGIGNLVLANDNGCVASQILPKSAVDRIADALGVECIQMSIGDVPFVGS 149
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVG 643 +GVF+ T +V IG + AE DV V+ T I G+ ++G L GN NG L+ +L+ + +V V+ + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG Sbjct: 13 LGVFATCTEDVAIVPIGTAGKAIDLL-AEQLDV-KVISTLINGSIVVGSLSKGNSNGFLISRDANVSDLKDV------EVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVG 141
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METPE (Translation initiation factor 6 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=eif6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12 Identity = 45/149 (30.20%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVG 643 M L +E +G+F+++ +V S + + + L +VKT + G+ IIG L +GN G ++ E++ ++ + V +E ++A GN I ND +A H D+D T E I VLGV V R T++G VG Sbjct: 1 MIRTLAYEGDPHIGIFTRVLEDIAVVPPEASADYCAALKEALG--VTLVKTHVQGSSIIGSLVSGNSRGAIVSGLAYPDEIR----AIEEYREVMLLEGSMNAAGNVILANDQMAAVHPDMDNATIEQIHSVLGVPVIRLTLSGIKTVG 143
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12 Identity = 48/137 (35.04%), Postives = 69/137 (50.36%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVG 643 +GVF+ T LV G + E L +V+T + G+ +IG L GN NG L + T E++ L V + + +L+A+GN + ND AL H +L + E+IA L VEV+R TIAG VG Sbjct: 13 IGVFATCTEDVVLVPTGTKPETCAILEDSLDA--RIVETLVNGSVVIGALSRGNSNGFLYSYGTDAGEMKELTG-----VEAEILPGKLNAVGNIVLANDSAALVHPELSDKAIEVIASTLKVEVYRGTIAGIKNVG 142
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METTH (Translation initiation factor 6 OS=Methanobacterium thermoautotrophicum GN=eif6 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.051e-12 Identity = 47/150 (31.33%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 197 MATRLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGS 646 M R+ + +GV+ +T++ L+ E F L V+K SI G+ + G L GN NG ++ + D+E+ L + + V RI ER +A+GN + ND+ A+ L + ++I DVL V+V T+AG +VGS Sbjct: 1 MIRRINLSGNPNLGVYISVTDSVALIPQNTPEKFEGVLREALE--VEVLKVSISGSSLNGALAVGNSNGFVVSNQAMDREIDALAAAGVEAV---RIPERFTAVGNLVLANDNGAVASPLLSDDALQVIGDVLEVDVKVSTLAGLNIVGS 145
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_METKA (Translation initiation factor 6 OS=Methanopyrus kandleri GN=eif6 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.373e-11 Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 2 Query: 233 VGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGS 646 +G + + Y +VA + + E DV VV+T++ G+ ++G L A N NG L P + E++ +R V V + +++A+GN + NDH AL H DLD E+I VLG V R + G VGS Sbjct: 14 IGAWIAASEEYAVVAPKVPDDIVERVK-EALDV-EVVRTTVAGSNLVGALLAVNSNGALFPRHAREHEIRVVREL---GVEVDVLPSKMNAVGNLVLTNDHGALVHPDLDDHALEVIESVLGGRVVRGELGGVKTVGS 146
BLAST of FC920236 vs. ExPASy Swiss-Prot
Match: IF6_HALS3 (Translation initiation factor 6 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif6 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11 Identity = 44/154 (28.57%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 206 RLMFENSCEVGVFSKLTNAYCLVAIGGSESFYSTFEAELADVFPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSTE 667 R F S +GVF++ T + LV + F + EL P V+T++GG+ +G L AGN +GLL+ + ++E + + V V + ++A GN + ND A H+ L + + + L V R +AG VG+ +T+ Sbjct: 3 RAAFRGSAYIGVFARATESCVLVRPDLDDDFVDSIADELG--VPAVQTTVGGSSTVGSLAAGNSSGLLVSNRIRERERDRIEAA---GVTVGELPGAVNAAGNVVVANDDGAYVHSGLSDDAVAAVEETLDVSATRGQLAGVDTVGTAAVATTD 151 The following BLAST results are available for this feature:
BLAST of FC920236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920236 ID=FC920236; Name=FC920236; organism=Citrus clementina; type=EST; length=724bpback to top |