FC920242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1C_MOUSE (Tubulin alpha-1C chain OS=Mus musculus GN=Tuba1c PE=1 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1C_HUMAN (Tubulin alpha-1C chain OS=Homo sapiens GN=TUBA1C PE=1 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1C_CRIGR (Tubulin alpha-1C chain OS=Cricetulus griseus GN=TUBA1C PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1B_MACFA (Tubulin alpha-1B chain OS=Macaca fascicularis GN=TUBA1B PE=2 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211
BLAST of FC920242 vs. ExPASy Swiss-Prot
Match: TBA1B_HUMAN (Tubulin alpha-1B chain OS=Homo sapiens GN=TUBA1B PE=1 SV=1) HSP 1 Score: 349.747 bits (896), Expect = 8.165e-96 Identity = 162/211 (76.78%), Postives = 184/211 (87.20%), Query Frame = 3 Query: 54 MRECISIHIGHAGIQVGNACWELYCLEHGIQPDGQMLSDKTVGGGDDAFNTFFSETGAGKHVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNESIYD 686 MRECISIH+G AG+Q+GNACWELYCLEHGIQPDGQM SDKT+GGGDD+FNTFFSETGAGKHVPRAVF+DLEPTVIDEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEI+DL LDRIRKLAD CTGLQGFLVFH+ VDYGKKSKL F++YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNE+IYD Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYD 211 The following BLAST results are available for this feature:
BLAST of FC920242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 415
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920242 ID=FC920242; Name=FC920242; organism=Citrus clementina; type=EST; length=686bpback to top |