FC920243

Overview
NameFC920243
Unique NameFC920243
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO7I (Hydroxyacylglutathione hydrolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 76/214 (35.51%), Postives = 114/214 (53.27%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ +  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+A QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVKKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTASQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO27 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28
Identity = 76/214 (35.51%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQSL   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPF (Hydroxyacylglutathione hydrolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.780e-28
Identity = 79/215 (36.74%), Postives = 115/215 (53.49%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKI---IEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  +P   DNY +L+ +  T+  AVVDP +   +   ++A                  DH GG E +K+   G  VYG + +N+ G    +++ D   + G   +V ++  P HT GHI+YY  G       +F GDTLF AGCG+ FEG+ +QM+QSL   L +LP+ T VYC HEYT+ NL FA  VEP N  +  +L     QR+ G+ T
Sbjct:    2 IQISALPAFTDNYIWLLQDHATQRCAVVDPGDAAPVQAWLDA--HPGWVLGDILITHHHHDHVGGVETLKKAT-GATVYGPASENIPGRDVALKDNDTVRVLGWDFDVYAV--PGHTLGHIAYYHHG------LLFCGDTLFAAGCGRLFEGTPQQMHQSLS-RLAALPEDTLVYCTHEYTLSNLKFAAAVEPDNRDIAARLEKVTRQRENGVMT 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBFM (Hydroxyacylglutathione hydrolase OS=Vibrio fischeri (strain MJ11) GN=gloB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 70/191 (36.65%), Postives = 94/191 (49.21%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            + +  IP   DNY +LI         VVDP +   ++E  K+               DH GG  ++    P + V G   + +   TH V +GD   +      + L  P HT GH++Y        D  +F GD LF AGCG+ FEG+AEQM+ SL   + +LP  T+VYC HEYT  NL FAL VEP N
Sbjct:    2 LSVKSIPAFNDNYIWLI-HNNDNHCVVVDPGDATPVLECIKEHDFILDAILITHHHHDHIGGVPELVRQFPSVNVVGPENEPIPTLTHPVGDGDFVELFDE-QFMVLGVPGHTNGHVAYV------GDEKLFCGDALFSAGCGRLFEGTAEQMFNSL-QKMAALPDETEVYCAHEYTASNLAFALAVEPDN 183          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_VIBF1 (Hydroxyacylglutathione hydrolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gloB PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 70/191 (36.65%), Postives = 94/191 (49.21%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSN 600
            + +  IP   DNY +LI         VVDP +   ++E  K+               DH GG  ++    P + V G   + +   TH V +GD   +      + L  P HT GH++Y        D  +F GD LF AGCG+ FEG+AEQM+ SL   + +LP  T+VYC HEYT  NL FAL VEP N
Sbjct:    2 LSVKSIPAFNDNYIWLI-HNNDNHCVVVDPGDATPVLECIKEHDFILDAILITHHHHDHIGGVPELVRQFPNVNVVGPENEPIPTLTHPVGDGDFVELFDE-QFMVLGVPGHTNGHVAYI------GDEKLFCGDALFSAGCGRLFEGTAEQMFNSL-QKMAALPDETEVYCAHEYTASNLAFALAVEPDN 183          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOUT (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain UTI89 / UPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 75/214 (35.05%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQS+   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSI-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECOK1 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O1:K1 / APEC GN=gloB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 75/214 (35.05%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQS+   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSI-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_ECO45 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 75/214 (35.05%), Postives = 113/214 (52.80%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDK-FSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQ---QKLAWAQNQRQAGLP 657
            M +  IP  +DNY +++ +E  +   +VDP + E ++ A                  DH GG +++ E  P I VYG      KG T  V++G+  F +G   +V++  TP HT GHI Y+        P +F GDTLF  GCG+ FEG+  QMYQS+   L +LP  T V C HEYT+ N+ FAL++ P ++ +    +K+   + + Q  LP
Sbjct:    1 MNLNSIPAFDDNYIWVLNDEAGR-CLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIA--TPGHTLGHICYF------SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSI-KKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLP 204          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_DECAR (Hydroxyacylglutathione hydrolase OS=Dechloromonas aromatica (strain RCB) GN=gloB PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.855e-28
Identity = 77/212 (36.32%), Postives = 112/212 (52.83%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSI-GAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKLQQKLAWAQNQRQAGLPT 660
            ++I  IP  +DNY +L+     K A VVDP +   ++   +                DH GG  ++K      +VY    +++ GC+  +  G+   + G  V V+++  P HT GH++YY  G      A+  GDTLF AGCG+ FEG+  QM  SL  ++ +LP  T +YC HEYT  NL FAL VEP+N  LQ ++A     R AGLP+
Sbjct:    2 LEISFIPAFKDNYIWLLTRG--KRAFVVDPGDAAPVLARLEAGGLMLEGILITHHHADHQGGVAELKARWQA-EVYAPGNESITGCSCPLSGGESIDVLGQKVTVMAV--PGHTLGHLAYYAPG------ALLCGDTLFGAGCGRLFEGTPAQMSASLD-SIAALPGDTLIYCAHEYTEMNLRFALAVEPNNQALQARVAKVAALRAAGLPS 201          
BLAST of FC920243 vs. ExPASy Swiss-Prot
Match: GLO2_YERE8 (Hydroxyacylglutathione hydrolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gloB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.511e-27
Identity = 78/213 (36.62%), Postives = 103/213 (48.36%), Query Frame = 1
Query:   28 MKIFHIPCLEDNYAYLIIEETTKEAAVVDPVEPEKIIEAAKQXXXXXXXXXXXXXXWDHAGGNEKIKEMVPGIKVYGGSLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGHISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEPSNVKL---QQKLAWAQNQRQAGLP 657
            M +  IP  +DNY +L+ +E  K   +VDP E   ++ A  Q               DH GG   ++   P I VYG      KG T  V  GD  SIG   N   +  P HT  HI+YY        P +F GDTLF AGCG+ FEG+  QMY S+   L  LP  T +   HEYT+ NL FA  + PS+  +   QQ++   + + Q  LP
Sbjct:    1 MNLISIPAFQDNYIWLLADEQ-KHCVIVDPGESAPVLAALSQGQYLPQAILLTHHHNDHVGGVADLRRHFPEIPVYGPQETANKGATIMVTGGDHLSIGGQ-NYQVIAVPGHTLEHIAYY------SKPYLFCGDTLFSAGCGRLFEGTPAQMYASI-QQLAQLPDETLICSAHEYTLANLKFARFILPSDQDIATYQQQIMQLRAKNQPSLP 204          
The following BLAST results are available for this feature:
BLAST of FC920243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
GLO2_ECO7I5.192e-2835.51Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO275.192e-2835.51Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_PSEPF6.780e-2836.74Hydroxyacylglutathione hydrolase OS=Pseudomonas fl... [more]
GLO2_VIBFM8.855e-2836.65Hydroxyacylglutathione hydrolase OS=Vibrio fischer... [more]
GLO2_VIBF18.855e-2836.65Hydroxyacylglutathione hydrolase OS=Vibrio fischer... [more]
GLO2_ECOUT8.855e-2835.05Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOK18.855e-2835.05Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO458.855e-2835.05Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_DECAR8.855e-2836.32Hydroxyacylglutathione hydrolase OS=Dechloromonas ... [more]
GLO2_YERE81.511e-2736.62Hydroxyacylglutathione hydrolase OS=Yersinia enter... [more]

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Properties
Property NameValue
Genbank descriptionC32005G09EF RVDevelop1 Citrus clementina cDNA clone C32005G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920243 ID=FC920243; Name=FC920243; organism=Citrus clementina; type=EST; length=662bp
CTTCGTGCACTTGAGCAGAGAATAAAAATGAAAATCTTTCATATTCCTTG
TTTGGAAGACAACTATGCCTACCTGATCATTGAAGAGACCACTAAAGAAG
CTGCAGTTGTTGATCCAGTGGAGCCAGAGAAGATCATTGAGGCTGCCAAA
CAACACGGTGTCAATCTCACCACCGTTCTCACTACTCATCATCACTGGGA
CCATGCTGGAGGGAACGAAAAGATAAAGGAGATGGTGCCTGGGATTAAGG
TGTATGGTGGCTCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAA
AATGGTGATAAGTTCTCAATTGGGGCTCATGTCAATGTACTGTCTCTTCA
CACGCCTTGCCATACCAAAGGTCACATAAGTTATTATGTGACTGGCAAAG
AGGGAGAAGACCCAGCTGTTTTCACTGGAGACACACTGTTTGTCGCTGGT
TGTGGAAAATTTTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTG
CGTAACATTGGGCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATG
AGTATACAGTGAAGAACCTACTATTTGCTCTTACTGTCGAACCAAGCAAT
GTGAAGCTACAGCAAAAATTGGCGTGGGCTCAGAACCAGCGGCAAGCCGG
CCTGCCAACCAT
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