FC920247

Overview
NameFC920247
Unique NameFC920247
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length465
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_WOLPM (Chaperone protein htpG OS=Wolbachia pipientis wMel GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.918e-26
Identity = 58/114 (50.88%), Postives = 83/114 (72.81%), Query Frame = 1
Query:  124 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 465
            ETE   F AE+ ++L+++I++ Y+NK+IFLRELISN+SDA DK+R+ES  + + LD   EL I I  +K  N L I D+GIGM + DL++NLGTIA SGT++F++A+    D S
Sbjct:   10 ETENLKFDAEVGKVLNIVIHSLYTNKDIFLRELISNASDACDKLRYESQLNPNLLDLSDELKITISSNKDKNELYITDNGIGMNRQDLIDNLGTIASSGTQKFLDAIKNSKDSS 123          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_ENT38 (Chaperone protein htpG OS=Enterobacter sp. (strain 638) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.918e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 450
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK N TL+I D+GIGM + +++++LGTIA+SGTK F+E++ +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDNRTLTIADNGIGMNRDEVIDHLGTIAKSGTKSFLESMGS 111          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_WIGBR (Chaperone protein htpG OS=Wigglesworthia glossinidia brevipalpis GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 58/105 (55.24%), Postives = 83/105 (79.05%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 444
            ET  FQ+E+ QLL+L+I++ YSNKEIFLRELISN+SDALDK+RF S++D+     Q +L I I  DK   +++I D+GIGM+K +++ NLGTIA+SGTK F++++
Sbjct:    5 ETLEFQSEVKQLLNLMIHSLYSNKEIFLRELISNASDALDKLRFLSISDEKIKIKQNKLCIFIDYDKNKKSITIQDNGIGMSKKEVIENLGTIAKSGTKSFIKSI 109          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCM (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain M66-2) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 447
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  NTL+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_VIBCH (Chaperone protein htpG OS=Vibrio cholerae GN=htpG PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 447
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  NTL+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_VIBC3 (Chaperone protein htpG OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 447
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA+DK+RF++L+         EL + +  DK  NTL+I D+GIGMT+ +++ NLGTIA+SGT EF   L+
Sbjct:   10 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLS 115          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 450
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 450
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_SHIBS (Chaperone protein htpG OS=Shigella boydii serotype 4 (strain Sb227) GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 56/107 (52.34%), Postives = 82/107 (76.64%), Query Frame = 1
Query:  130 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAA 450
            ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF +L++    +   EL + +  DK   TL+I D+G+GMT+ +++++LGTIA+SGTK F+E+L +
Sbjct:    5 ETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGS 111          
BLAST of FC920247 vs. ExPASy Swiss-Prot
Match: HTPG_PASMU (Chaperone protein htpG OS=Pasteurella multocida GN=htpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.812e-26
Identity = 58/110 (52.73%), Postives = 84/110 (76.36%), Query Frame = 1
Query:  115 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 444
            M++  ET  FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF++L+     +   +L + I  D+   TL+I D+GIGMT+ +++++LGTIA+SGTKEF+ AL
Sbjct:    1 MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSVPELYEGDGDLKVRIRFDEEKGTLTISDNGIGMTRDEVIDHLGTIAKSGTKEFLSAL 110          
The following BLAST results are available for this feature:
BLAST of FC920247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_WOLPM2.918e-2650.88Chaperone protein htpG OS=Wolbachia pipientis wMel... [more]
HTPG_ENT382.918e-2652.34Chaperone protein htpG OS=Enterobacter sp. (strain... [more]
HTPG_WIGBR3.812e-2655.24Chaperone protein htpG OS=Wigglesworthia glossinid... [more]
HTPG_VIBCM3.812e-2654.72Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_VIBCH3.812e-2654.72Chaperone protein htpG OS=Vibrio cholerae GN=htpG ... [more]
HTPG_VIBC33.812e-2654.72Chaperone protein htpG OS=Vibrio cholerae serotype... [more]
HTPG_SHISS3.812e-2652.34Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL3.812e-2652.34Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIBS3.812e-2652.34Chaperone protein htpG OS=Shigella boydii serotype... [more]
HTPG_PASMU3.812e-2652.73Chaperone protein htpG OS=Pasteurella multocida GN... [more]

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Properties
Property NameValue
Genbank descriptionC32005H02EF RVDevelop1 Citrus clementina cDNA clone C32005H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920247 ID=FC920247; Name=FC920247; organism=Citrus clementina; type=EST; length=465bp
AACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTTCGC
TTCCAAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGAAC
GGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGGCT
GAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAACAA
GGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGATA
AGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACCA
GAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTAT
TATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTTG
GTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGCT
GGGGCGGATGTGAGC
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