FC920257

Overview
NameFC920257
Unique NameFC920257
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length502
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_COXBR (Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=hemL PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.704e-24
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  152 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            +S   FN A+  MPGGVNSPVRAF +VGG P       G ++ D+D  +YIDYVGSWGP I+G     V+ A  E ++ G SFGAPC  E  LA ++   +PS E    VNSGT+A
Sbjct:    4 HSAALFNKAQNYMPGGVNSPVRAFGAVGGVPRFIKKASGPYLIDVDEKKYIDYVGSWGPMILGHAHPAVIQAAQEAVQNGLSFGAPCENEIKLAALIGEFMPSIEKVRMVNSGTEA 119          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_COXBN (Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=hemL PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.704e-24
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  152 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            +S   FN A+  MPGGVNSPVRAF +VGG P       G ++ D+D  +YIDYVGSWGP I+G     V+ A  E ++ G SFGAPC  E  LA ++   +PS E    VNSGT+A
Sbjct:    4 HSAALFNKAQNYMPGGVNSPVRAFGAVGGVPRFIKKASGPYLIDVDEKKYIDYVGSWGPMILGHAHPAVIQAAQEAVQNGLSFGAPCENEIKLAALIGEFMPSIEKVRMVNSGTEA 119          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_COXB2 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiella burnetii (strain CbuG_Q212) GN=hemL PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.704e-24
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  152 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            +S   FN A+  MPGGVNSPVRAF +VGG P       G ++ D+D  +YIDYVGSWGP I+G     V+ A  E ++ G SFGAPC  E  LA ++   +PS E    VNSGT+A
Sbjct:    4 HSAALFNKAQNYMPGGVNSPVRAFGAVGGVPRFIKKASGPYLIDVDEKKYIDYVGSWGPMILGHAHPAVIQAAQEAVQNGLSFGAPCENEIKLAALIGEFMPSIEKVRMVNSGTEA 119          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_COXB1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiella burnetii (strain CbuK_Q154) GN=hemL PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.704e-24
Identity = 57/116 (49.14%), Postives = 72/116 (62.07%), Query Frame = 2
Query:  152 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            +S   FN A+  MPGGVNSPVRAF +VGG P       G ++ D+D  +YIDYVGSWGP I+G     V+ A  E ++ G SFGAPC  E  LA ++   +PS E    VNSGT+A
Sbjct:    4 HSAALFNKAQNYMPGGVNSPVRAFGAVGGVPRFIKKASGPYLIDVDEKKYIDYVGSWGPMILGHAHPAVIQAAQEAVQNGLSFGAPCENEIKLAALIGEFMPSIEKVRMVNSGTEA 119          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_CORDI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Corynebacterium diphtheriae GN=hemL PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.704e-24
Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 2
Query:  149 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            + S+E F  A++  PGGVNSPVRAF SVGG      S KGS ++D+DGNEY+D V SWGP ++G    +++ A+ +    G SFGAP   E  +AEM++      E+R  VNSGT+A
Sbjct:    5 QRSQELFARAQQFTPGGVNSPVRAFGSVGGHARFIQSAKGSKLYDVDGNEYVDLVCSWGPMLLGNAHPEIVEAVQKAATNGLSFGAPTEAEVKIAEMIVDRTSVEEVR-MVNSGTEA 120          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_AKKM8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=hemL PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.704e-24
Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = 2
Query:  146 LKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            +  S + F+ A+ ++PGGVNSPVRAF++V G P    S KG+++ D DG + IDY+G+WGPAI+G     VL A+   + +G  +G P   E  +AEM+   VPS E    VNSGT+A
Sbjct:    1 MNQSAQLFSRARSVIPGGVNSPVRAFRNVDGDPFFVQSAKGAYITDADGRQLIDYIGTWGPAILGHAPQPVLDAVHAAVDRGLGYGIPAPAEVDMAEMITDMVPSVEKVRMVNSGTEA 118          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_VEREI (Glutamate-1-semialdehyde 2,1-aminomutase OS=Verminephrobacter eiseniae (strain EF01-2) GN=hemL PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.449e-24
Identity = 54/111 (48.65%), Postives = 72/111 (64.86%), Query Frame = 2
Query:  167 FNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            F  AK L+PGGVNSPVRAFK+VGG P      +G++ WD +   +IDY+GSWGP I+G     VL A+ +   +G SFGAP   E  LAE ++  +PS +M   V+SGT+A
Sbjct:   12 FERAKALIPGGVNSPVRAFKAVGGTPRFVKRARGAYFWDANDQRFIDYIGSWGPMILGHGHPAVLEAVQQAALEGLSFGAPTERELELAEAILRLLPSMQMIRLVSSGTEA 122          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_SYNFM (Glutamate-1-semialdehyde 2,1-aminomutase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=hemL PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.449e-24
Identity = 54/120 (45.00%), Postives = 74/120 (61.67%), Query Frame = 2
Query:  140 ITLKNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            +T   S   +  A   +PGGVNSPVR+ ++VG  PI     KG ++WD DGN Y+D+V SWGP I+G     V+ A+   ++KGTS+G P  +E  +A  V+  VPS EM   VNSGT+A
Sbjct:    1 MTRDRSNLLYEDAGRFIPGGVNSPVRSGRAVGTNPIFIREAKGCYLWDEDGNRYVDFVASWGPLIVGHAHPAVVEAVRAAVEKGTSYGIPTEIEVRMARKVVEMVPSIEMVRMVNSGTEA 120          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_METCA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Methylococcus capsulatus GN=hemL PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.449e-24
Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 2
Query:  152 NSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            +S   F  A   +PGGVNSPVRAF+ VGG P+  D  +G +++ +DG  YIDYVGSWGP I+G    +VL A+   + +G S+GAP + E  +A+ V + +PS +    V+SGT+A
Sbjct:    3 DSTTLFADACRFIPGGVNSPVRAFRGVGGTPVFVDRAEGPYVYGVDGKAYIDYVGSWGPMILGHAHPEVLTAVHAAVDRGLSYGAPTVAETAMAKTVCALMPSLDRVRMVSSGTEA 118          
BLAST of FC920257 vs. ExPASy Swiss-Prot
Match: GSA_LEPIN (Glutamate-1-semialdehyde 2,1-aminomutase OS=Leptospira interrogans GN=hemL PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.449e-24
Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 2
Query:  149 KNSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIEFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGQPDDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSREMRCFVNSGTQA 499
            K SEE F  AK++ PGGV+SPVR+F+SVGG P+ F S KG+ + DI G EYIDY  S+GP I+G  D +V   + ET +   SFGA       LAE++ S VP  E   FVNSGT+A
Sbjct:   18 KTSEELFERAKKVSPGGVHSPVRSFRSVGGTPVFFASAKGATLTDISGKEYIDYCLSFGPLILGHRDPEVEEVVRETTEIAWSFGAAEPYSLELAELISSRVPWAEKVRFVNSGTEA 134          
The following BLAST results are available for this feature:
BLAST of FC920257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_COXBR5.704e-2449.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiel... [more]
GSA_COXBN5.704e-2449.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiel... [more]
GSA_COXB25.704e-2449.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiel... [more]
GSA_COXB15.704e-2449.14Glutamate-1-semialdehyde 2,1-aminomutase OS=Coxiel... [more]
GSA_CORDI5.704e-2447.01Glutamate-1-semialdehyde 2,1-aminomutase OS=Coryne... [more]
GSA_AKKM85.704e-2444.92Glutamate-1-semialdehyde 2,1-aminomutase OS=Akkerm... [more]
GSA_VEREI7.449e-2448.65Glutamate-1-semialdehyde 2,1-aminomutase OS=Vermin... [more]
GSA_SYNFM7.449e-2445.00Glutamate-1-semialdehyde 2,1-aminomutase OS=Syntro... [more]
GSA_METCA7.449e-2444.83Glutamate-1-semialdehyde 2,1-aminomutase OS=Methyl... [more]
GSA_LEPIN7.449e-2451.28Glutamate-1-semialdehyde 2,1-aminomutase OS=Leptos... [more]

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Properties
Property NameValue
Genbank descriptionC32006A03EF RVDevelop1 Citrus clementina cDNA clone C32006A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920257 ID=FC920257; Name=FC920257; organism=Citrus clementina; type=EST; length=502bp
GGCAGCTACAATTACAGGGGTAGGAGTTGGGTTAGGGTTTTCATGTTCAT
CAAAGCTCACCAAGAGAATTTCTTCTTCTACTGGATCCTCTCGCTGTAGT
GTTAAAATGTCGGTCTCTGTTGAGGAGCAGAAGAAAAATATCACTTTAAA
AAACTCTGAAGAAGCTTTCAATGTCGCCAAGGAATTGATGCCTGGAGGTG
TAAATTCACCTGTACGTGCCTTCAAATCTGTTGGTGGTCAACCTATTGAG
TTTGATTCCGTCAAGGGCTCACACATGTGGGATATCGATGGCAACGAGTA
CATTGACTATGTAGGTTCTTGGGGGCCGGCAATTATTGGTCAGCCAGATG
ATCAGGTACTAGCAGCCTTGGGTGAAACAATGAAGAAAGGAACCAGCTTT
GGTGCTCCTTGTCTTCTAGAGAATGTTCTTGCAGAAATGGTAATCTCAGC
TGTTCCAAGCAGAGAAATGCGTTGTTTTGTTAACTCAGGCACACAAGCAT
GC
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