FC920261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: HLYBC_ECOLX (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Escherichia coli GN=hlyB PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.874e-16 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + C G+T I++AHRLST++NA I V++ GK+ E G H LL + P+ Y+ + QLQ Sbjct: 619 ALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELL-SEPESLYSYLYQLQ 705
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: HLYB3_ECOLX (Alpha-hemolysin translocation ATP-binding protein hlyB OS=Escherichia coli GN=hlyB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 3.874e-16 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + C G+T I++AHRLST++NA I V++ GK+ E G H LL + P+ Y+ + QLQ Sbjct: 619 ALVNNPKILIFDEATSALDYESEHIIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELL-SEPESLYSYLYQLQ 705
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MSBA_RHOFD (Lipid A export ATP-binding/permease protein msbA OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=msbA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ A I++LDEATSALD ESER VQ AL +TT+V+AHRLSTI +A I V+D G++ E G+H+ LL+ YA + +LQ Sbjct: 495 ALLKDAPILILDEATSALDTESERQVQAALAVLMKNRTTLVIAHRLSTIEHADCILVLDQGRIVETGTHAELLR--AGSYYANLSRLQ 580
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MSBA_MANSM (Lipid A export ATP-binding/permease protein msbA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=msbA PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R + +++LDEATSALD ESER++Q AL+ +T +V+AHRLSTI A I VID G++ E GSH LL N G Y ++ ++Q Sbjct: 497 ALLRDSPVLILDEATSALDTESERAIQAALEELQKDRTVLVIAHRLSTIEKADEILVIDHGEICERGSHEELLALN--GAYKQLHKMQ 582
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MSBA_FRATO (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=msbA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A +++ DEATSALD ESER VQ+AL+ TTIV+AHRLST+ NA I V+D G V E G H LL+ G Y R+ Q Sbjct: 522 ALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGMVVESGKHQELLEQG--GLYTRLYQ 605
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MSBA_FRATH (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. holarctica (strain LVS) GN=msbA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A +++ DEATSALD ESER VQ+AL+ TTIV+AHRLST+ NA I V+D G V E G H LL+ G Y R+ Q Sbjct: 522 ALLKNAPVLIFDEATSALDNESERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGMVVESGKHQELLEQG--GLYTRLYQ 605
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MSBA_ACIAD (Lipid A export ATP-binding/permease protein msbA OS=Acinetobacter sp. (strain ADP1) GN=msbA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ A I++LDEATSALD ESE +Q+A D A +TTIV+AHRLSTI NA I V+D G++ E G+H LL G Y ++ Q Sbjct: 486 AILKNAPILILDEATSALDNESEHFIQKAFDEAMQNRTTIVIAHRLSTIENADRIVVMDKGQIIEQGTHQELLLK--QGAYFQLHQ 569
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: LKTB_PASTR (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella trehalosi GN=lktB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + + C G+T I++AHRLST++NA I V++ G++ E G H LL+N+ +G Y+ + QLQ Sbjct: 620 ALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNS-NGLYSYLHQLQ 706
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: LKTB_MANGL (Leukotoxin translocation ATP-binding protein lktB OS=Mannheimia glucosida GN=lktB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + + C G+T I++AHRLST++NA I V++ G++ E G H LL+N+ +G Y+ + QLQ Sbjct: 620 ALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNS-NGLYSYLHQLQ 706
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: LKTB7_PASHA (Leukotoxin translocation ATP-binding protein lktB OS=Pasteurella haemolytica GN=lktB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.059e-16 Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A V +I++ DEATSALD ESE + + + + C G+T I++AHRLST++NA I V++ G++ E G H LL+N+ +G Y+ + QLQ Sbjct: 620 ALVNNPKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNS-NGLYSYLHQLQ 706 The following BLAST results are available for this feature:
BLAST of FC920261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920261 ID=FC920261; Name=FC920261; organism=Citrus clementina; type=EST; length=478bpback to top |