FC920261
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: AB19B_ARATH (ABC transporter B family member 19 OS=Arabidopsis thaliana GN=ABCB19 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.345e-21 Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ ++LLDEATSALDAESE +QEAL+R G+TT+VVAHRLSTIR I VI DG++ E GSHS L+ + P+G Y+R++QLQ Sbjct: 1162 AVLKNPTVLLLDEATSALDAESECVLQEALERLMRGRTTVVVAHRLSTIRGVDCIGVIQDGRIVEQGSHSELV-SRPEGAYSRLLQLQ 1248 HSP 2 Score: 95.1301 bits (235), Expect = 1.680e-19 Identity = 54/107 (50.47%), Postives = 70/107 (65.42%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSAR 322 A ++ +I+LLDEATSALDA SE VQEALDR G+TT+VVAHRL TIRN IAVI G+V E G+H L+ + G YA +I+ Q +++G S+ S R Sbjct: 517 AMLKDPKILLLDEATSALDASSESIVQEALDRVMVGRTTVVVAHRLCTIRNVDSIAVIQQGQVVETGTHEELIAKS--GAYASLIRFQ-----EMVGTRDFSNPSTR 616
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: AB22B_ARATH (ABC transporter B family member 22 OS=Arabidopsis thaliana GN=ABCB22 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.062e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A ++ ++LLDEATSALD+ESER VQEALD A G+TTIV+AHRLSTIRN VI V +G++ E GSH L++ N DG Y +++LQ Sbjct: 531 AIIKSPTLLLLDEATSALDSESERVVQEALDNATIGRTTIVIAHRLSTIRNVDVICVFKNGQIVETGSHEELME-NVDGQYTSLVRLQ 617 HSP 2 Score: 98.9821 bits (245), Expect = 1.164e-20 Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A ++ ++LLDEATSALD +SER VQ+AL R G+T++V+AHRLSTI+N I V+D GKV E G+HS LL P G Y ++ LQR Sbjct: 1171 AVLKNPSVLLLDEATSALDNQSERMVQDALGRLMVGRTSVVIAHRLSTIQNCDTITVLDKGKVVECGTHSSLLAKGPTGVYFSLVSLQR 1259
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: AB16B_ARATH (ABC transporter B family member 16 OS=Arabidopsis thaliana GN=ABCB16 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 3.999e-21 Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQ-----VIGMTSGSSSSAR 322 A ++ I+LLDEATSALD ESER VQEALD A G+TTIV+AHRLSTIRNA +I V+ +G + E GSH L++ DG Y +++LQ+ + + +G+ G SS R Sbjct: 498 ALIKSPIILLLDEATSALDLESERVVQEALDNASVGRTTIVIAHRLSTIRNADIICVLHNGCIVETGSHDKLME--IDGKYTSLVRLQQMKNEESCDNTSVGVKEGRVSSLR 607 HSP 2 Score: 99.7525 bits (247), Expect = 6.822e-21 Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 8 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 ++ I+LLDEATSALD++SER VQ+AL+ GKT++V+AHRLSTI+N IAV+D GKV E G+H+ LL P G Y ++ LQR Sbjct: 1137 LKNPSILLLDEATSALDSQSERVVQDALEHVMVGKTSVVIAHRLSTIQNCDTIAVLDKGKVVESGTHASLLAKGPTGSYFSLVSLQR 1223
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MDR3_CRIGR (Multidrug resistance protein 3 OS=Cricetulus griseus GN=PGY3 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.223e-21 Identity = 51/88 (57.95%), Postives = 66/88 (75.00%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A VR +I+LLDEATSALD ESE VQ ALD+A G+TTIV+AHRLST+RNA VIA +DG + E GSHS L++ +G Y +++ +Q Sbjct: 546 ALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFEDGVIVEQGSHSELMQK--EGVYFKLVNMQ 631 HSP 2 Score: 96.2857 bits (238), Expect = 7.543e-20 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A +R+ ++LLDEATSALD ESE+ VQEALD+A G+T IV+AHRLSTI+NA +I VI +GKV E G+H LL G Y M+ +Q Sbjct: 1190 ALIRQPRVLLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQK--GIYFSMVNIQ 1275
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MDR2_CRIGR (Multidrug resistance protein 2 OS=Cricetulus griseus GN=PGY2 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 5.223e-21 Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSS 316 A VR +I+LLDEATSALD ESE VQ ALD+A G+TTIV+AHRLST+RNA VIA D G + E G+H L+K G Y R++ +Q + +G + S S Sbjct: 543 ALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHEELMKEK--GIYCRLVMMQTRGNEVELGSEADGSQS 645 HSP 2 Score: 96.2857 bits (238), Expect = 7.543e-20 Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A VR+ I+LLDEATSALD ESE+ VQEALD+A G+T IV+AHRLSTI+NA +I VI +GKV E G+H LL G Y M+Q Sbjct: 1187 ALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQK--GIYFSMVQ 1270
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: ABCBA_MOUSE (ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus musculus GN=Abcb10 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.164e-20 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 271 A ++ +I+LLDEATSALDAE+E VQEALDR G+T +++AHRLSTI+NA+ +AV+D GK+ E G+H LL P+G Y +++ Q F Sbjct: 612 ALLKNPKILLLDEATSALDAENEHLVQEALDRLMEGRTVLIIAHRLSTIKNANFVAVLDHGKICEHGTHEELLL-KPNGLYRKLMNKQSF 700
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: AB9B_ARATH (ABC transporter B family member 9 OS=Arabidopsis thaliana GN=ABCB9 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.164e-20 Identity = 52/109 (47.71%), Postives = 76/109 (69.72%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQVIGMTSGSSSSARPK 328 A ++ +I+LLDEATSALDAESER VQ+AL S +TT+VVAHRL+TIR A VIAV+ GK+ E G+H +++ +P+G Y+++++LQ G ++ S RP+ Sbjct: 507 AILKNPKILLLDEATSALDAESERIVQDALVNLMSNRTTVVVAHRLTTIRTADVIAVVHQGKIVEKGTHDEMIQ-DPEGAYSQLVRLQE-------GSKEEATESERPE 607 HSP 2 Score: 88.9669 bits (219), Expect = 1.204e-17 Identity = 45/72 (62.50%), Postives = 57/72 (79.17%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 217 A ++ +I+LLDEATSALDAESER VQ+ALDR +TT+VVAHRL+TI+NA VIAV+ +G +AE G H L Sbjct: 1188 AILKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVAHRLTTIKNADVIAVVKNGVIAEKGRHETL 1259
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: AB8B_ARATH (Putative ABC transporter B family member 8 OS=Arabidopsis thaliana GN=ABCB8 PE=5 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.520e-20 Identity = 48/89 (53.93%), Postives = 68/89 (76.40%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A +R I+LLDEATSALD ESE +Q ALD+ +G+TT+VVAH+LST+R A++IA++++G V ELGSH L+ N YA++++LQR Sbjct: 512 AIIRNPVILLLDEATSALDGESETLIQNALDQVAAGRTTLVVAHKLSTVRGANIIAMLENGSVRELGSHEDLMTKN--NHYAKLVKLQR 598 HSP 2 Score: 77.0258 bits (188), Expect = 4.735e-14 Identity = 43/86 (50.00%), Postives = 60/86 (69.77%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGK--TTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 253 AF+R I+LLDE TS+LD+ SE+ VQ+AL R + + TT+VVAHRL+T++N IA+I DG V E GS+ HL N G ++R+ Sbjct: 1150 AFLRSPIILLLDEVTSSLDSNSEQEVQDALARIMASRNMTTVVVAHRLNTLKNLDCIALIVDGTVIETGSYDHL--KNIGGQFSRL 1233
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MDR65_DROME (Multidrug resistance protein homolog 65 OS=Drosophila melanogaster GN=Mdr65 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.985e-20 Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 268 A VR +I+LLDEATSALD +SE+ VQ+ALD ACSG+T IV+AHRLST++NA VI VI +G+V E G+H L+ G YA++ + Q+ Sbjct: 1214 ALVRNPKILLLDEATSALDLQSEQLVQQALDTACSGRTCIVIAHRLSTVQNADVICVIQNGQVVEQGNHMQLISQG--GIYAKLHKTQK 1300 HSP 2 Score: 87.4261 bits (215), Expect = 3.504e-17 Identity = 47/86 (54.65%), Postives = 60/86 (69.77%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 259 A ++ +I+LLDEATSALD +SE+ VQ+ALD A G+TTIVV+HRLS IR A I I DGKV E GSH L+ +G Y M++ Sbjct: 557 ALIQNPKILLLDEATSALDYQSEKQVQQALDLASKGRTTIVVSHRLSAIRGADKIVFIHDGKVLEEGSHDDLMA--LEGAYYNMVR 640
BLAST of FC920261 vs. ExPASy Swiss-Prot
Match: MDR1_HUMAN (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3) HSP 1 Score: 98.2117 bits (243), Expect = 1.985e-20 Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 265 A VR +I+LLDEATSALD ESE VQ ALD+A G+TTIV+AHRLST+RNA VIA DDG + E G+H L+K G Y +++ +Q Sbjct: 544 ALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEK--GIYFKLVTMQ 629 HSP 2 Score: 95.5153 bits (236), Expect = 1.287e-19 Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 2 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQ 283 A VR+ I+LLDEATSALD ESE+ VQEALD+A G+T IV+AHRLSTI+NA +I V +G+V E G+H LL G Y M+ +Q T Q Sbjct: 1189 ALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQK--GIYFSMVSVQAGTKRQ 1280 The following BLAST results are available for this feature:
BLAST of FC920261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 263
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920261 ID=FC920261; Name=FC920261; organism=Citrus clementina; type=EST; length=478bpback to top |