FC920262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL4D_BOVIN (ADP-ribosylation factor-like protein 4D OS=Bos taurus GN=ARL4D PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20 Identity = 50/139 (35.97%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 228 QEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVT-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSI 629 Q + + +IGL +AGKTSL+ + + + IPT GFN K+ +T ++WD+GGQ + R +W Y R +V+VVDAA+ + L ++ ELH + G+P+LVL NK D+PGALS + + ++ + Sbjct: 19 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-IPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 156
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.746e-20 Identity = 45/139 (32.37%), Postives = 82/139 (58.99%), Query Frame = 3 Query: 225 KQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 K++ + +IGL AGK++L+ + G +PT+GFN+ + N+++ +WD+GGQ + R++W+ Y +AI++VVD+ D + + + E+ LL + L GI +L+ NK D A++ + D + L SI R+ Sbjct: 23 KKQTRILMIGLDGAGKSTLLYKLKLGDIVST-VPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRK 160
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 51/146 (34.93%), Postives = 87/146 (59.59%), Query Frame = 3 Query: 207 SAASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREV 644 ++ + + +L +GL NAGKT+L++++ + + PT+ ++ G+V +DLGG + R +W+ Y V+ IV++VDAAD + L+ S++EL L LS +P L+LGNKIDK A+ + L +GL + TG++V Sbjct: 12 ASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYNTTGKDV 156
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 222 FKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGL 620 +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD + L S+ EL L+ +++ +P+L+LGNKID+P A+S++ L + GL Sbjct: 22 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFO (ADP-ribosylation factor 1 OS=Plasmodium falciparum (isolate NF54) GN=ARF1 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 47/140 (33.57%), Postives = 81/140 (57.86%), Query Frame = 3 Query: 219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGR 638 F K+++ + ++GL AGKT+++ V G IPT+GFN+ V N++ +WD+GGQ + R +W Y +++VVD+ D + + +R LH ++N+ L +LV NK D P A+S +T+++ L +I R Sbjct: 13 FQKKDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREGLHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRER 151
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19 Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 3 Query: 207 SAASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 S+ F E ++GL AGKT+++ + + + IPT+GFN+ VT +T+ +WD+GGQ + R++W+ Y + +V+VVD++D + + ++ EL LL +P L+ LLV NK D P A S LT + L S+ RE Sbjct: 9 SSFMFPNIECRTLMLGLDGAGKTTILYKLKLNE-TVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNRE 152
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.492e-19 Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 222 FKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGL 620 +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD + L S+ EL L+ +++ +P+L+LGNKID+P A+S++ L + GL Sbjct: 22 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.492e-19 Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 222 FKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGL 620 +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD + L S+ EL L+ +++ +P+L+LGNKID+P A+S++ L + GL Sbjct: 22 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.492e-19 Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 222 FKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGL 620 +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD + L S+ EL L+ +++ +P+L+LGNKID+P A+S++ L + GL Sbjct: 22 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.492e-19 Identity = 47/133 (35.34%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 222 FKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGL 620 +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD + L S+ EL L+ +++ +P+L+LGNKID+P A+S++ L + GL Sbjct: 22 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGL 153 The following BLAST results are available for this feature:
BLAST of FC920262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920262 ID=FC920262; Name=FC920262; organism=Citrus clementina; type=EST; length=654bpback to top |