FC920262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARF1_DICDI (ADP-ribosylation factor 1 OS=Dictyostelium discoideum GN=arfA PE=1 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.006e-20 Identity = 53/152 (34.87%), Postives = 86/152 (56.58%), Query Frame = 3 Query: 186 GKLF*IGSAASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 GKLF + F K++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + + EL +LN+ L LLV NK D P A+S +TD++ L S+ R+ Sbjct: 6 GKLF----SRFFGKKDMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEFKNINFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEACDELTKMLNEDELRDAVLLVFCNKQDLPNAMSVAEVTDKLNLHSLRSRK 152
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 55/154 (35.71%), Postives = 87/154 (56.49%), Query Frame = 3 Query: 177 WDCGKLF*IGSAASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGR 638 W + + S+ + + +L +GL NAGKT+L++++ + PTV +++ GN +DLGG + R +W+ Y V+ IV++VDAADP + S++EL LL L +P L+LGNKID P A+S+ L D +GL TG+ Sbjct: 2 WIVNWFYDVLSSLGLWNKNAKLLFLGLDNAGKTTLLHMLKNDRMAVSN-PTVHPTSEELSIGNCKFTTFDLGGHIQARRVWKDYFPEVNGIVFLVDAADPTRFAESKAELDSLLAIEQLKTVPFLILGNKIDMPQAVSELELKDALGLYQTTGK 154
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 55/145 (37.93%), Postives = 85/145 (58.62%), Query Frame = 3 Query: 207 SAASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 ++ + + +L +GL NAGKT+L++++ + + PT +++ GNV +DLGG + R +W+ Y V IVY+VD ADP+ SR EL LL LS +P+LVLGNKIDK A+S+ L +GL + TG++ Sbjct: 12 ASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMTTTGKD 155
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 F +EM + ++GL AGKT+++ + G IPT+GFN+ VT N+ ++WDLGGQ R W Y A++YVVD+ D D + IS+SEL +L + L L+V NK D A++ + + +GL ++ R+ Sbjct: 13 FGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRK 152
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 52/154 (33.77%), Postives = 89/154 (57.79%), Query Frame = 3 Query: 207 SAASFF---------KQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 S ASFF K++ + +IGL AGK++L+ + G IPT+GFN+ + N+++ +WD+GGQ + R++W+ Y +AI++VVD+ D + + + E+ +LL + L GI +LVL NK D A++ + + + L SI R+ Sbjct: 8 SLASFFSNIFSLFEGKKDTRILMIGLDGAGKSTLLFKLKLGDVVLT-IPTIGFNVETIVYKNLSMTVWDVGGQHKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDNLLIQDELKGIQILVLANKQDMNNAMNTAEIVNSLNLNSIKDRK 160
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARF2_DROME (ADP-ribosylation factor 2 OS=Drosophila melanogaster GN=Arf102F PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 48/140 (34.29%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGR 638 F K++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D D ++ + EL ++L + L LLV NK D P A++ LTD++ L + R Sbjct: 13 FGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRLNQLRNR 151
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20 Identity = 46/140 (32.86%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 228 QEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREVC 647 +++ L ++GL NAGKT+ + G + ED+ PTVGF+ + +G + ++DLGG R R +W+ Y +++VVD++D + + ++ + ++L P +SG P+LVL NK DK GAL + + + + L+ + C Sbjct: 20 RKVTLVMVGLDNAGKTATAKGIQ-GEHPEDVAPTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKC 158
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 237 ELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGREV 644 ++ +GL NAGKT+L++++ + M PT+ ++ GNV +DLGG + R +W Y V+ IVY+VD D + LS S++EL LL L+ +P L+LGNKID PGA+S+ L +GL TG+ V Sbjct: 22 KMLFLGLDNAGKTTLLHMLKNDRLAV-MQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGV 156
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 51/145 (35.17%), Postives = 86/145 (59.31%), Query Frame = 3 Query: 207 SAASFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 S+ + + +L +GL NAGKT+L++++ + + PT+ ++ G+V +DLGG + R +W+ Y V+ IV++VDAADP+ + S++EL L LS +P L+LGNKID P A+ + L +GL + TG++ Sbjct: 12 SSLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYNTTGKD 155
BLAST of FC920262 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.128e-20 Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 219 FFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITGRE 641 F +EM + ++GL AGKT+++ + G IPT+GFN+ VT N+ ++WDLGGQ R W Y A++YVVD+ D D + IS+SEL +L + L L+V NK D A++ + + +GL ++ R+ Sbjct: 13 FGTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRK 152 The following BLAST results are available for this feature:
BLAST of FC920262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920262 ID=FC920262; Name=FC920262; organism=Citrus clementina; type=EST; length=654bpback to top |