FC920266

Overview
NameFC920266
Unique NameFC920266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14439 contig Ccv1_Contig14439:38..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27
Identity = 63/144 (43.75%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  223 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            LC NNCGFFGS AT+++CSKCY+D   ++  A +  ++  S    T  S+ S S   A +                S A+E    V A  K   SRC+SC+KRVGLTGF CRCG  +C +HRY E+H C FD++ A RDAI +A
Sbjct:   14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLP--------------SSTAAEAGVVVAAVAKA--SRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARA 141          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27
Identity = 60/160 (37.50%), Postives = 89/160 (55.62%), Query Frame = 1
Query:  217 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAK--------------PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            P LC NNCGFFGS AT N+CSKC++D+  ++  +  A  ++            ++S+AA      +S      +S  P   ++  E VEAK              P + P RC +C++RVG+TGF+CRCG ++C +HRY+EQH C FD++   +D I KA
Sbjct:   10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHAL------------TQSLAAVGAAASSS------VSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKA 151          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.974e-27
Identity = 58/156 (37.18%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  184 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            DET C +   G  +C+  CGFFGS AT NMCS+CY++     D  + AA++   +          E V  A    + + +   +     S +S  +E   AK    P+RC++C+K+VGLTGFKCRCG  +C  HR+++ H C FDY++A ++ I K
Sbjct:   11 DETACGSGA-GAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDL----------ELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAK 155          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.208e-25
Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = 1
Query:  223 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            LC N+CGF G+ AT N+C  C+         +  AAS        T+S      V      VQ+S+     + V+   A  +  S +A      +RC SC++RVGLTGF+CRCG LYC +HRYS++H+C FDY++AARDAI +
Sbjct:   21 LCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASP------STTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIAR 157          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.716e-24
Identity = 58/153 (37.91%), Postives = 89/153 (58.17%), Query Frame = 1
Query:  199 QAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPS-RCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            QA    P+LC + CGF+G+ AT++MCS CY+   L    A +A     S+   ++++  + +V + +  V ++ V     S + +      E      K+ P+ RC+SCKK+VGL GF CRCG  YC +HRY E+H C FD++ A+RDAI +A
Sbjct:  196 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNG-ATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFSSKNN-----PEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARA 342          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.547e-24
Identity = 67/186 (36.02%), Postives = 97/186 (52.15%), Query Frame = 1
Query:  217 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP----SCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A +T+D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYS+ HNC ++Y+  A + I K
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.633e-24
Identity = 65/186 (34.95%), Postives = 92/186 (49.46%), Query Frame = 1
Query:  217 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP-----------------------------------SCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S     V   S S      +GS   A + +D  ASSV+P  +S Q                                      + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYS+ HNC ++Y+  A + I K
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.051e-24
Identity = 58/170 (34.12%), Postives = 89/170 (52.35%), Query Frame = 1
Query:  166 GENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPK-------IISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIKA 654
            G   +   +  Q+    P LC+  CGFFGS + M++CSKCY+ I  ++ Q  +A +++        S   S   +    +  A  VEPK       ++S +PS +S + E+ E       +RC  C K+VG+ GFKC+CG+ +C  HRY E H+C FD++   R  I KA
Sbjct:    2 GSEQNDSTSFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAV------EKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPS-SSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKA 164          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.348e-23
Identity = 66/186 (35.48%), Postives = 96/186 (51.61%), Query Frame = 1
Query:  217 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP----SCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYS+ HNC ++Y+  A + I K
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC920266 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.003e-23
Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 1
Query:  169 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSEQHNCXFDYRTAARDAIIK 651
            +  D + T  +AP     LC N+CGF G+ AT N+C  C+           LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CRCG+L+C  HRYS++H C +DY++AARDAI +
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIAR 151          
The following BLAST results are available for this feature:
BLAST of FC920266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
SAP5_ORYSJ7.637e-2743.75Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH7.637e-2737.50Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP7_ORYSJ9.974e-2737.18Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ3.208e-2540.56Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ORYSJ2.716e-2437.91Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_PONAB3.547e-2436.02AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN4.633e-2434.95AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP9_ARATH6.051e-2434.12Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_HUMAN1.348e-2335.48AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
SAP1_ORYSJ3.003e-2335.50Zinc finger A20 and AN1 domain-containing stress-a... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32006B01EF RVDevelop1 Citrus clementina cDNA clone C32006B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920266 ID=FC920266; Name=FC920266; organism=Citrus clementina; type=EST; length=668bp
GGACACCCGGAAAGGGAAACGAGGACGTCTCTAATCGGTTTTTGCCTGCT
CTCTCCCCGTAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGGAT
GCTGGTTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCT
GTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCA
AGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTG
GAAGTGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATATAATG
CTGAAACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGT
GAATGAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTG
TTGATGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCA
TCATGTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGG
TCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCA
AATGTCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCGGAACAA
CATAACTGCNCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAATTAA
AGCAACCCTGTGATCAGG
back to top