FC920275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_ANASP (Probable 30S ribosomal protein PSRP-3 OS=Anabaena sp. (strain PCC 7120) GN=asr3168 PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 2 Query: 446 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSGGN 682 + +LK +W+++N+ LA+DQ + G GT PL++YFFWPR DAWEELK LESK WIS + LLN+ T++IN WQ+ G N Sbjct: 3 KFILKILWLDENVALAVDQVV-GKGTSPLTKYFFWPRNDAWEELKKELESKHWISDLDRVELLNKATEVINYWQEEGRN 80
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_NOSP7 (Probable 30S ribosomal protein PSRP-3 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=Npun_F4413 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 2 Query: 446 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSGGN 682 + +LK +W+++N+ LA+DQ + G GT PL++YFFWPR DAWEELK LESK WI+ + LLN+ T++IN WQ+ G N Sbjct: 3 KFILKILWLDENVALAVDQIV-GKGTSPLTKYFFWPRNDAWEELKKELESKHWITDLDRVELLNKATEVINYWQEEGRN 80
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_GUITH (Probable 30S ribosomal protein 3, chloroplastic OS=Guillardia theta GN=ycf65 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.431e-20 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 2 Query: 443 PRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQ 670 P+ LK +W++ N+ +A+DQ I G GT PL+ YFFWPR DAWE++K LESKPWI +K I LLN+ T++IN WQ+ Sbjct: 2 PKFTLKVLWLDNNVAVAVDQII-GNGTSPLTCYFFWPRNDAWEQVKAELESKPWIEEKERIELLNKTTELINCWQE 76
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_EUGGA (Probable 30S ribosomal protein 3, chloroplastic OS=Euglena granulata GN=ycf65 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 440 KPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSGGNL 685 K L+LKF+W+EK+I + LDQ + G PL+++FFWP+KDAWEE+K LES+ WI+Q + LLN T++IN WQ+ N+ Sbjct: 2 KKELILKFLWLEKSIAVCLDQKV-GDSITPLTEFFFWPQKDAWEEMKNFLESQSWITQSDSVNLLNNITEVINFWQERDTNV 82
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_SYNP6 (Probable 30S ribosomal protein PSRP-3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1758_d PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 446 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSG 676 R +K +W+ +N+ +A+DQ + G T PL+ Y+FWPR DAWE+LKT LESK WI++ + LLNQ T++IN WQ+ G Sbjct: 16 RFTIKILWLNENVAIAVDQVV-GKATSPLTAYYFWPRHDAWEQLKTELESKSWITEAERVELLNQATEVINYWQEEG 91
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_SYNE7 (Probable 30S ribosomal protein PSRP-3 OS=Synechococcus elongatus (strain PCC 7942) GN=mut3G PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 446 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSG 676 R +K +W+ +N+ +A+DQ + G T PL+ Y+FWPR DAWE+LKT LESK WI++ + LLNQ T++IN WQ+ G Sbjct: 16 RFTIKILWLNENVAIAVDQVV-GKATSPLTAYYFWPRHDAWEQLKTELESKSWITEAERVELLNQATEVINYWQEEG 91
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_ACAM1 (Probable 30S ribosomal protein PSRP-3 OS=Acaryochloris marina (strain MBIC 11017) GN=AM1_2922 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.751e-19 Identity = 39/77 (50.65%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 446 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSG 676 + +LK +W+++N+ LA+DQ + G G+ PL+ YFFWPR DAWE LKT LE K WI + I +LN+ T++IN WQ+ G Sbjct: 3 KFILKVLWLDENVALAVDQVV-GNGSSPLTSYFFWPRNDAWENLKTELEKKTWIDEVERISILNKATEVINYWQEEG 78
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_PROMA (Probable 30S ribosomal protein PSRP-3 OS=Prochlorococcus marinus GN=Pro_1593 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 41/84 (48.81%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 437 EKPRLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSGGNLT 688 ++ R +LK +W+ N+ LA+DQ + G GT PL+ YFFWPR+DAWE LKT LE K WI+ + +LN+ T++IN WQ+ G T Sbjct: 27 DEGRFLLKILWLPDNVALAVDQIVGG-GTSPLTAYFFWPREDAWETLKTELEDKAWITDNERVEVLNKATEVINYWQEEGKGKT 109
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_EUGST (Probable 30S ribosomal protein 3, chloroplastic OS=Euglena stellata GN=ycf65 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 39/73 (53.42%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 452 VLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQ 670 +LKF+W+EK++ + LDQ I G T P++++FFWP+ DAWEE+K LE K WI Q ++ILLNQ T++IN WQ+ Sbjct: 5 ILKFLWLEKSVAVGLDQKI-GDRTTPVTEFFFWPQHDAWEEMKNFLEDKSWIDQSEVVILLNQITEVINYWQE 76
BLAST of FC920275 vs. ExPASy Swiss-Prot
Match: RRP3_TRIEI (Probable 30S ribosomal protein PSRP-3 OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_3451 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 446 RLVLKFIWMEKNIGLALDQTIPGYGTIPLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQXTDIINLWQQSG 676 + +LK +W++ N+ LA+DQ + G GT PL+ YFFWPR DAWE+LK LE K WIS+ + LLN+ T+II+ WQ+ G Sbjct: 3 KFILKVVWLDDNVALAVDQVV-GNGTSPLTCYFFWPRNDAWEQLKKELEGKHWISEADRVALLNKATEIISYWQEEG 78 The following BLAST results are available for this feature:
BLAST of FC920275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920275 ID=FC920275; Name=FC920275; organism=Citrus clementina; type=EST; length=699bpback to top |