FC920285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_NATPD (50S ribosomal protein L10e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl10e PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 52/156 (33.33%), Postives = 86/156 (55.13%), Query Frame = 3 Query: 60 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRA 524 M +PA YR I Y + + G+P K+ Y +G + +++ + L E+ + +LEA+R++ N+ M K G+D + + +R P V+R NK + AGADR+ GMR AFGK GT AR+ G+ + ++ C ++ A++A RRA Sbjct: 1 MSDKPASMYRDIDKPAYTRREYITGIPGSKVAQYKMGNFEADPEDYEVQISLIVDEEVQIRHGSLEASRLSANRRMLKELGEDGDYKMILRKFPHQVIRENKQATGAGADRVSDGMRQAFGKIVGTAARINKGERVFTIWCHPEDADAAKDAFRRA 156
BLAST of FC920285 vs. ExPASy Swiss-Prot
Match: RL10_NANEQ (50S ribosomal protein L10e OS=Nanoarchaeum equitans GN=rpl10e PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.017e-13 Identity = 46/165 (27.88%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 81 CYRQIKNKPYPK------SRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLASWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML-SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKD-SNSLHAQEALRRAKFKFPGRQK 551 CYR+++ PY + + G +R++ +G + E+ + L + E + A+EA R+ NKY+ GK + +R +P H+ R ++ AGADR+ GMR +FG+P+G ++ G+ LLS+ D + + + L+ A+ K P R + Sbjct: 9 CYRKLE-VPYTRVSRSKNKNYIPGAKPTMVRLFHMGELTRNPSEWQYEASLVAKENHQIRDNAIEAIRVMVNKYLESTLGKKRYLFIIRKYPHHIYREKPVVGGYAGADRISQGMRLSFGRPKGRAVQIYEGEKLLSIFFDDITKAKDIKYFLQVARSKLPWRYR 172 The following BLAST results are available for this feature:
BLAST of FC920285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920285 ID=FC920285; Name=FC920285; organism=Citrus clementina; type=EST; length=700bpback to top |