FC920320

Overview
NameFC920320
Unique NameFC920320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.660e-47
Identity = 90/135 (66.67%), Postives = 114/135 (84.44%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            IGIDLGTTYSCVGV+++G VEI+ANDQGNR TPS+VAFTD+ERL+G+AAK+QAA+NP  T+FD KRLIGRKF D  VQ D+K  P+++V+  GKP ++V  R GE K F PEEIS+M+L+KMKETAEA+LG+ +R
Sbjct:    9 IGIDLGTTYSCVGVFQHGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPQNTVFDAKRLIGRKFADPTVQSDLKHWPFQVVSEGGKPKVRVSYR-GEDKAFYPEEISSMVLSKMKETAEAYLGQPVR 142          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.660e-47
Identity = 92/134 (68.66%), Postives = 111/134 (82.84%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F++  VQ DMK  P+K+V+  GKP IQV  + GE K F PEEIS+M+L KMKE AEA+LG K+
Sbjct:    9 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPSNTVFDAKRLIGRRFDEPVVQADMKHWPFKVVSEGGKPKIQVDYK-GENKTFFPEEISSMVLVKMKEIAEAYLGHKV 141          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.660e-47
Identity = 89/139 (64.03%), Postives = 118/139 (84.89%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDG-KPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            G  IGIDLGTTYSCVGV+ +  VE+IANDQGNR TPS+VAFT++ERLIG++AKNQ A+NPD T+FD KRLIGR+F+D  VQ D+K  P+K++ +DG KP ++V+ + GETK+F+PEEIS+M+L KMKE AE+FLGK+++
Sbjct:    7 GVAIGIDLGTTYSCVGVWLHDRVEVIANDQGNRTTPSYVAFTETERLIGDSAKNQVAMNPDNTVFDAKRLIGRRFQDPAVQEDVKPFPFKVICKDGDKPAVEVKYK-GETKIFAPEEISSMVLLKMKEIAESFLGKEVK 144          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.660e-47
Identity = 95/136 (69.85%), Postives = 112/136 (82.35%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K+  + D KP I VQ R GE K F+PE+IS+M+L KMKETAEA+LGK+++
Sbjct:    7 IGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDLVVQSDMKHWPFKVTTKGDDKPVISVQYR-GEEKTFTPEKISSMVLLKMKETAEAYLGKQVK 141          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 4.780e-47
Identity = 91/139 (65.47%), Postives = 112/139 (80.58%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            +   +GIDLGTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGRKF+D EV  D K  P+K++++ GKP IQV+ + GETK FSPEEIS+M+LTKMKE AE +LG  ++
Sbjct:    1 MSKAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVINDAKHFPFKVIDKAGKPVIQVEYK-GETKTFSPEEISSMVLTKMKEIAEGYLGSTVK 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.780e-47
Identity = 94/136 (69.12%), Postives = 112/136 (82.35%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            IGIDLGTTYSCVGV++N  ++IIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K+  + D KP I VQ R GE K F+PEEIS+M+L KMKETAEA+LGK+++
Sbjct:    7 IGIDLGTTYSCVGVWQNERLDIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYR-GEEKTFTPEEISSMVLLKMKETAEAYLGKQVK 141          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.780e-47
Identity = 92/139 (66.19%), Postives = 115/139 (82.73%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDG-KPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            + + IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAF ++ERLIG+AAKNQ A+NP  TIFD KRLIGRKF D  +Q DMK  P+K++ ++G KP++QV+ + GE K FSPEE+S+M+L KMKETAEA+LGK I
Sbjct:    1 MSSSIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFNETERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFSDPVIQSDMKHWPFKVIAKEGDKPHLQVEFK-GEVKTFSPEEVSSMVLLKMKETAEAYLGKTI 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 6.243e-47
Identity = 91/137 (66.42%), Postives = 113/137 (82.48%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P++++N   +P +QV+ + GETK F PEEIS+M+L KMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPCNTVFDAKRLIGRRFDDGVVQSDMKHWPFEVINDSTRPKLQVEYK-GETKSFYPEEISSMVLVKMKEIAEAYLGKTV 139          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.243e-47
Identity = 95/138 (68.84%), Postives = 111/138 (80.43%), Query Frame = 1
Query:  229 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIV--NRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            T IGIDLGTTYSCVGV+ N  VEIIANDQGNR TPS+VAF D+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K++    D KP IQV  + GETK FSPEEIS+M+L+KMKETAE++LGK +
Sbjct:    2 TSIGIDLGTTYSCVGVWLNDRVEIIANDQGNRTTPSYVAFNDTERLIGDAAKNQVAMNPINTVFDAKRLIGRKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFK-GETKTFSPEEISSMVLSKMKETAESYLGKPV 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.243e-47
Identity = 92/134 (68.66%), Postives = 110/134 (82.09%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P++++N   KP +QV  + GETK F PEEIS+M+LTKMKE AEA+LG  +
Sbjct:    7 IGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDAKRLIGRKFGDPVVQADMKHWPFRVINDGDKPKVQVSYK-GETKAFYPEEISSMVLTKMKEIAEAYLGHPV 139          
The following BLAST results are available for this feature:
BLAST of FC920320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP76_PIG3.660e-4766.67Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP71_ORYLA3.660e-4768.66Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP70_PYRSA3.660e-4764.03Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_LEIAM3.660e-4769.85Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP71_CANAL4.780e-4765.47Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_LEIMA4.780e-4769.12Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HS7C2_DICDI4.780e-4766.19Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_ONCMY6.243e-4766.42Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HS7C3_DICDI6.243e-4768.84Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HS71B_PIG6.243e-4768.66Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionC32006G10EF RVDevelop1 Citrus clementina cDNA clone C32006G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920320 ID=FC920320; Name=FC920320; organism=Citrus clementina; type=EST; length=643bp
GGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACATCGAA
ACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAGGGTA
TAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGGGTCC
CTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTTCAAT
TGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGATCTTG
GTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGAAATC
ATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCATTCAC
TGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCTGTCA
ATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAGTTT
GAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGATTGT
GAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGCGAGA
CCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAAGATG
AAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAGGATGC
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