FC920320

Overview
NameFC920320
Unique NameFC920320
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15512 contig Ccv1_Contig15512:5..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.138e-48
Identity = 92/137 (67.15%), Postives = 117/137 (85.40%), Query Frame = 1
Query:  229 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            + IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAF+D+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF+D ++Q DMK  P+ +VN  GKP I+V+ + GE K F+PEEIS+M+LTKMKETAEA+LG+ ++
Sbjct:    3 SAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVNDGGKPKIRVEFK-GERKTFAPEEISSMVLTKMKETAEAYLGQSVK 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48
Identity = 93/137 (67.88%), Postives = 116/137 (84.67%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  +GIDLGTT+SCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D+ VQ D+K   +K++N  GKP I+V+ R GETK FS EEIS+M+L KMKETAEA+LGKK+
Sbjct:    5 GPAVGIDLGTTFSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDRAVQDDIKHWAFKVINAGGKPKIEVEYR-GETKCFSAEEISSMVLLKMKETAEAYLGKKV 140          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48
Identity = 91/135 (67.41%), Postives = 114/135 (84.44%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 627
            +   IGIDLGTTYSCVG+Y++  +EIIANDQGNR TPS+VAFTD+ERLIG++AKNQ A+NP  T+FD KRLIGRKF+D EVQ DMK  P+K++ + GKP  QV+ + GETK F+PEEIS+MILTKM+ETAE++LG
Sbjct:    1 MAPAIGIDLGTTYSCVGIYRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDSAKNQVAINPHNTVFDAKRLIGRKFQDAEVQADMKHFPFKVIEKAGKPVTQVEFK-GETKDFTPEEISSMILTKMRETAESYLG 134          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48
Identity = 92/135 (68.15%), Postives = 114/135 (84.44%), Query Frame = 1
Query:  223 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 627
            +   +GIDLGTTYSCVG++++  +EIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D EVQ DMK  P+KI ++ GKP IQV+ + GETK F+PEEIS+M+LTKM+ETAEA+LG
Sbjct:    1 MAPAVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQVAMNPANTVFDAKRLIGRKFADPEVQADMKHFPFKITDKGGKPVIQVEFK-GETKEFTPEEISSMVLTKMRETAEAYLG 134          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.486e-48
Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 1
Query:  193 ISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            ++ A E+    GTVIGIDLGTTYSCV V KNG  EI+AN+QGNRITPS+V+FTD ERLIG+AAKNQAA NP  TIFD+KRLIG ++ D  VQRD+K  PY +VN+  KPY++V ++ GE K F+PEE+S MIL KMK+ AE +LGKK+
Sbjct:   40 VARAAEDHEDYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVSFTDDERLIGDAAKNQAASNPKNTIFDIKRLIGLQYNDPTVQRDIKHLPYTVVNKGNKPYVEVTVK-GEKKEFTPEEVSGMILGKMKQIAEDYLGKKV 186          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48
Identity = 97/135 (71.85%), Postives = 113/135 (83.70%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K+V + D KP IQVQ R GETK F+PEEIS+M+L KMKE AE++LGK++
Sbjct:    7 IGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDSVVQSDMKHWPFKVVTKGDDKPVIQVQFR-GETKTFNPEEISSMVLLKMKEVAESYLGKQV 140          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48
Identity = 92/137 (67.15%), Postives = 117/137 (85.40%), Query Frame = 1
Query:  229 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            + IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAF+D+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF+D ++Q DMK  P+ +VN  GKP I+V+ + GE K F+PEEIS+M+LTKMKETAEA+LG+ ++
Sbjct:    3 SAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVNDCGKPKIRVEFK-GERKTFAPEEISSMVLTKMKETAEAYLGQSVK 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.941e-48
Identity = 92/137 (67.15%), Postives = 117/137 (85.40%), Query Frame = 1
Query:  229 TVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            + IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAF+D+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF+D ++Q DMK  P+ +VN  GKP I+V+ + GE K F+PEEIS+M+LTKMKETAEA+LG+ ++
Sbjct:    3 SAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFDDPKIQADMKHWPFTVVNDCGKPKIRVEFK-GERKTFAPEEISSMVLTKMKETAEAYLGQSVK 138          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.535e-48
Identity = 93/137 (67.88%), Postives = 114/137 (83.21%), Query Frame = 1
Query:  226 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 636
            G  +GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGR+F+D  VQ DMK  P+ +VN  G+P +QV+ + GETK F PEEIS+M+LTKMKE AEA+LGK +
Sbjct:    4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDSVVQSDMKHWPFTVVNDAGRPKVQVEYK-GETKSFYPEEISSMVLTKMKEIAEAYLGKTV 139          
BLAST of FC920320 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.535e-48
Identity = 95/136 (69.85%), Postives = 115/136 (84.56%), Query Frame = 1
Query:  235 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNR-DGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 639
            IGIDLGTTYSCVGV++N  VEIIANDQGNR TPS+VAFTDSERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMK  P+K++ + D KP IQVQ R GETK F+PEE+S+M+L+KMKE AE++LGK+++
Sbjct:    7 IGIDLGTTYSCVGVWQNERVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPRNTVFDAKRLIGRKFSDPVVQSDMKHWPFKVITKGDDKPVIQVQFR-GETKTFNPEEVSSMVLSKMKEIAESYLGKQVK 141          
The following BLAST results are available for this feature:
BLAST of FC920320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP74_ANOAL1.138e-4867.15Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_ECHGR1.486e-4867.88Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP70_CLAHE1.486e-4867.41Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_AJECA1.486e-4868.15Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
GRP78_KLULA1.486e-4863.5178 kDa glucose-regulated protein homolog OS=Kluyve... [more]
HSP74_TRYBB1.941e-4871.85Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP72_ANOAL1.941e-4867.15Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL1.941e-4867.15Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP7C_CHICK2.535e-4867.88Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP70_TRYCR2.535e-4869.85Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32006G10EF RVDevelop1 Citrus clementina cDNA clone C32006G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920320 ID=FC920320; Name=FC920320; organism=Citrus clementina; type=EST; length=643bp
GGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACACACTTCAAACATCGAA
ACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGGAGTTTGAAGCAGGGTA
TAATTGCTGCAGTACGCGCGATGGCTGGCTCGTGGAGAGCACGCGGGTCC
CTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTCTTTTTGCAATTTCAAT
TGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTGATTGGGATAGATCTTG
GTACAACTTATTCTTGTGTTGGTGTTTACAAGAATGGTCATGTCGAAATC
ATAGCCAATGATCAAGGAAACCGTATTACTCCATCATGGGTTGCATTCAC
TGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAGAATCAGGCTGCTGTCA
ATCCTGACAGGACCATCTTTGATGTCAAGAGACTTATTGGAAGAAAGTTT
GAGGACAAGGAGGTTCAGAGGGACATGAAGCTTGCTCCTTACAAGATTGT
GAATAGGGATGGAAAGCCTTATATTCAGGTTCAGATTAGGGACGGCGAGA
CCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTATGATACTGACTAAGATG
AAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAATTAGGATGC
back to top