FC920341

Overview
NameFC920341
Unique NameFC920341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL85_ARATH (GDSL esterase/lipase At5g45950 OS=Arabidopsis thaliana GN=At5g45950 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.104e-28
Identity = 68/204 (33.33%), Postives = 115/204 (56.37%), Query Frame = 3
Query:   57 MAIATSSASVAMRSWMMIIGI-AFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            +A  T   +VA++    ++ +    L  +       +  VFGDS VD GNNN++ T  + + PPYG +F  H+PTGR  +G   PD I++ +G    P  +L P L    L  GA+FASAG G  +D      N+     Q +YF  Y+  ++ ++G  ++ +++N A+ L+++G NDF+ N YLV ++ R +QFT+  Y++++
Sbjct:    4 VAFVTLLVAVALQPLPSVLSLDVHLLRQLAAKHNVTSILVFGDSSVDPGNNNFIKTEMKGNFPPYGENFINHKPTGRLCDGLLAPDYIAEAMGYPPIP-AFLDPSLTQADLTRGASFASAGSG-YDDLTANISNVWSFTTQANYFLHYKIHLTKLVGPLESAKMINNAIFLMSMGSNDFLQN-YLVDFT-RQKQFTVEQYIEFL 203          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL43_ARATH (GDSL esterase/lipase At2g31540 OS=Arabidopsis thaliana GN=At2g31540 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.189e-27
Identity = 69/170 (40.59%), Postives = 100/170 (58.82%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNY-LATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            A  +FGDS VD+GNNNY L T  RA+  PYG+D P  +  GRFSNG  I DII+ ++   E   P+L P L+ Q +L G  FASAG G  + T +     IR+  Q + F  Y  R+  ++G ++A +++N A V+++ G NDF+ NYY +P S R     +  Y  +I+
Sbjct:   35 AILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLS-TQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAFVVVSAGPNDFILNYYEIP-SRRLEYPFISGYQDFIL 202          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL39_ARATH (GDSL esterase/lipase At2g24560 OS=Arabidopsis thaliana GN=At2g24560 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.189e-27
Identity = 66/168 (39.29%), Postives = 99/168 (58.93%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTA-RADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKY 662
            A  +FGDS VD+GNNNY + T  +A   PYGID P H+ +GRF+NG    DII+ ++   +   P+L P L+ Q ++ G  FASAG G  + T +     IR+  Q   F  Y  R+ +++G ++A +++  ALV+I+ G NDF+ NYY +P    SR+   P+   Y
Sbjct:   34 AILIFGDSTVDTGNNNYHSQTIFKAKHLPYGIDLPNHKASGRFTNGKIFSDIIATKLNIKQFVPPFLQPNLSDQEIVTGVCFASAGAGYDDHTSLS-TQAIRVLDQQKMFKNYIARLKSIVGDKKAMEIIKNALVVISAGPNDFILNYYDIP----SRRLEFPHISGY 196          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL44_ARATH (GDSL esterase/lipase At2g31550 OS=Arabidopsis thaliana GN=At2g31550 PE=2 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.553e-27
Identity = 69/170 (40.59%), Postives = 100/170 (58.82%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNY-LATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            A  +FGDS VD+GNNNY L T  RA+  PYG+D P  +  GRFSNG  I DII+ ++   E   P+L P L+ Q +L G  FASAG G  + T +     IR+  Q + F  Y  R+  ++G ++A +++N A V+++ G NDF+ NYY +P S R     +  Y  +I+
Sbjct:   35 AILIFGDSTVDTGNNNYPLPTIFRAEHFPYGMDLPDGKANGRFSNGKLISDIIATKLNIKEFIPPFLQPNLSDQDILTGVCFASAGAGYDDLTSLS-TQAIRVSEQPNMFKSYIARLKGIVGDKKAMEIINNAFVVVSAGPNDFILNYYDIP-SRRLEYPFISGYQDFIL 202          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.553e-27
Identity = 69/192 (35.94%), Postives = 110/192 (57.29%), Query Frame = 3
Query:   99 WMMIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQ-QARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            W++++G+ F    +    +   +F+FGDSLVD+GNNN L + ARAD  PYGIDF    PTGRFSNG    D++++ +G       Y +  ++GQ +L G N+ASA  GI  +TG Q    I    Q++ +     +V  ++G +  A   + R +  + +G ND++NNY++  + + SRQ+T   Y   +IS
Sbjct:   14 WVLLLGLGF---KVKAEPQVPCYFIFGDSLVDNGNNNRLRSIARADYFPYGIDF--GGPTGRFSNGRTTVDVLTELLGFDNYIPAYST--VSGQEILQGVNYASAAAGIREETGAQLGQRITFSGQVENYKNTVAQVVEILGDEYTAADYLKRCIYSVGMGSNDYLNNYFMPQFYSTSRQYTPEQYADDLIS 198          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.028e-27
Identity = 69/185 (37.30%), Postives = 107/185 (57.84%), Query Frame = 3
Query:   48 NMSMAIATSSASVAMRSWMMIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNY 602
            +M M   T    V +  ++++  +A    S    A   A FVFGDSLVD+GNNN+L + AR++  PYGIDF  ++PTGRFSNG  I D I + +G  E P  ++     G  +L G N+ASA  GIL +TG        M RQ++ F +    +S  +  +  ++ + ++LV++++G ND++NNY
Sbjct:   11 DMMMMSCTVQTLVLVPWFLVVFVLAGGEDSSETTAMFPAMFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPEIP-AFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVVSLGNNDYINNY 194          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 3
Query:  174 FGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            FGDS+VDSGNNN+L T  + + PPYG DFP    TGRFS+G    DI+++R+G +E    YL+P+L  + LL G NFAS G G  +    + V ++ +  QL  F EY+ ++  ++G ++A  LV  +L L+    ND  +      Y+ARS ++   +Y  Y+
Sbjct:   54 FGDSIVDSGNNNHLRTALKCNFPPYGKDFPGKIATGRFSDGRVPSDIVAERLGIAETIPAYLNPKLKNEDLLKGVNFASGGSG-YDPLTAKLVKVVSLSDQLKNFQEYKNKLKVIVGEEKANFLVKNSLYLVVASSNDIAHT-----YTARSIKYNKTSYADYL 211          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL42_ARATH (GDSL esterase/lipase At2g30310 OS=Arabidopsis thaliana GN=At2g30310 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.707e-27
Identity = 64/170 (37.65%), Postives = 101/170 (59.41%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTA-RADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYII 668
            A  +FGDS VD+GNNNY + T  +A   PYG+D P H   GR+SNG  I D+I+ ++   E   P+L P ++ Q ++ G +FASAG G  +D        I + +Q   F  Y  R+  ++G ++A +++N ALV+I+ G NDF+ N+Y +P + R    T+  Y ++I+
Sbjct:   34 AILIFGDSTVDTGNNNYHSQTIFKAKHLPYGVDLPGHEANGRYSNGKVISDVIASKLNIKELVPPFLQPNISHQDIVTGVSFASAGAG-YDDRSSLSSKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIINNALVVISAGPNDFILNFYDIP-TRRLEYPTIHGYQEFIL 201          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL82_ARATH (GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26
Identity = 72/196 (36.73%), Postives = 112/196 (57.14%), Query Frame = 3
Query:   90 MRSWMMIIGIAFALGSIVRLAE-ARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQ-QARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            M   +M+I +A  + +I +    A  +F+FGDSLVD+GNNN L + ARA+  PYGIDF    PTGRFSNG    D+I+Q +G  +   PY S    GQ +L G N+ASA  GI ++TG Q    I    Q+        +V  ++G Q +A   +++ +  I +G ND++NNY++  + +   QF+  +Y   +++
Sbjct:    4 MSLMIMMIMVAVTMINIAKSDPIAPCYFIFGDSLVDNGNNNQLQSLARANYFPYGIDFAA-GPTGRFSNGLTTVDVIAQLLGFEDYITPYAS--ARGQDILRGVNYASAAAGIRDETGRQLGGRIAFAGQVANHVNTVSQVVNILGDQNEASNYLSKCIYSIGLGSNDYLNNYFMPTFYSTGNQFSPESYADDLVA 196          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL41_ARATH (GDSL esterase/lipase At2g30220 OS=Arabidopsis thaliana GN=At2g30220 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26
Identity = 60/152 (39.47%), Postives = 92/152 (60.53%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTA-RADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVP 614
            A  +FGDS  D+GNNNY +    +A+  PYG+D P H   GRFSNG  I D+IS ++   E   P+L P ++ Q ++ G  FASAG G  ++T +     I + +Q   F  Y  R+  ++G ++A +++N ALV+I+ G NDF+ N+Y +P
Sbjct:   33 AILIFGDSTADTGNNNYYSQAVFKANHLPYGVDLPGHEANGRFSNGKLISDVISTKLNIKEFVPPFLQPNISDQDIVTGVCFASAGAGYDDETSLS-SKAIPVSQQPSMFKNYIARLKGIVGDKKAMEIINNALVVISAGPNDFILNFYDIP 183          
The following BLAST results are available for this feature:
BLAST of FC920341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
GDL85_ARATH9.104e-2833.33GDSL esterase/lipase At5g45950 OS=Arabidopsis thal... [more]
GDL43_ARATH1.189e-2740.59GDSL esterase/lipase At2g31540 OS=Arabidopsis thal... [more]
GDL39_ARATH1.189e-2739.29GDSL esterase/lipase At2g24560 OS=Arabidopsis thal... [more]
GDL44_ARATH1.553e-2740.59GDSL esterase/lipase At2g31550 OS=Arabidopsis thal... [more]
GDL14_ARATH1.553e-2735.94GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL75_ARATH2.028e-2737.30GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL90_ARATH2.649e-2739.02GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]
GDL42_ARATH7.707e-2737.65GDSL esterase/lipase At2g30310 OS=Arabidopsis thal... [more]
GDL82_ARATH1.717e-2636.73GDSL esterase/lipase At5g45670 OS=Arabidopsis thal... [more]
GDL41_ARATH1.717e-2639.47GDSL esterase/lipase At2g30220 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32007A11EF RVDevelop1 Citrus clementina cDNA clone C32007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920341 ID=FC920341; Name=FC920341; organism=Citrus clementina; type=EST; length=671bp
AATCCAAGAAGAGTATATATCCATATATCTAATTAGAGTTTCGAAACAAT
ATGTCAATGGCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTG
GATGATGATTATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTG
CTGAGGCTCGAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGC
AACAACAACTACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGG
GATTGATTTTCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCA
ACATCCCTGACATTATCAGTCAGAGAATTGGCCAATCGGAAGCCCCATTG
CCATACTTGAGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAA
CTTCGCTTCAGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTG
TAAACATAATTAGAATGTTCAGACAATTGGATTACTTCGCGGAGTACCAG
CGTCGAGTGAGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAA
CCGAGCACTAGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACT
ATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAAT
TATGTCAAGTATATCATCTCT
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