FC920341

Overview
NameFC920341
Unique NameFC920341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14123 contig Ccv1_Contig14123:1..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21
Identity = 64/171 (37.43%), Postives = 90/171 (52.63%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQ-QARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIIS 671
            A F FGDS++D+GNNN L + ++ +  PYG DF   R TGRF NG    DII++ +G       Y  P L    L  G  FAS G G L+    +    I +  Q+  F  Y  R++ V+G Q QA  +++ A+ LI+ G ND    Y+     AR  Q+TLP Y   ++S
Sbjct:   35 ALFAFGDSILDTGNNNLLLSVSKVNFYPYGRDFIGGRATGRFGNGRVFSDIIAEGLGLKNLLPAYRDPYLWNNDLTTGVCFASGGSG-LDPITARTTGSIWVSDQVTDFQNYITRLNGVVGNQEQANAVISNAVYLISAGNNDIAITYFTT--GARRLQYTLPAYNDQLVS 202          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: EXL2_ARATH (GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana GN=EXL2 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21
Identity = 58/164 (35.37%), Postives = 86/164 (52.44%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATT-ARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTG------------IQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVP 614
            A  VFGDS+VD+GNN+ + TT AR + PPYGIDF    PTGRF NG    D I+ + G   +   Y +P L  + LL G  FAS G G +  T             +     I + +QL  F EY  ++  ++G ++ + ++  +L ++  G ND  N Y+ +P
Sbjct:   47 AIIVFGDSIVDAGNNDDIMTTLARCNYPPYGIDFDGGIPTGRFCNGKVATDFIAGKFGIKPSIPAYRNPNLKPEDLLTGVTFASGGAGYVPFTTQLSTYLFIYKPLLFLKGGIALSQQLKLFEEYVEKMKKMVGEERTKLIIKNSLFMVICGSNDITNTYFGLP 210          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.319e-21
Identity = 57/121 (47.11%), Postives = 74/121 (61.16%), Query Frame = 3
Query:   78 ASVAMRSWMMIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTG 440
            +S+  R  ++ + + F  G  +   +  A FVFGDSLV+ GNNNYLAT A+A+  P GIDF +  PTGRF+NG  I DII Q +G  E   PYL+P   G  +L GAN+A  G G LN  G
Sbjct:    2 SSLVSRCQVIALLVLFFFGVCLAGKDIPANFVFGDSLVEVGNNNYLATLAKANNFPNGIDFGS--PTGRFTNGRTIVDIIYQALGSDELTPPYLAPTTRGPLILNGANYAPGGSGPLNSPG 120          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.319e-21
Identity = 53/168 (31.55%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            A  VFGDS++D+GNNN L T  + + PPYG D+P    TGRFS+G    D+I++++G ++    Y++  L  + LL G  FAS G G  +    + +++I ++ QL YF EY  ++    G ++A+ ++  +  L+    ND  + Y      A++ ++   +Y  ++
Sbjct:   30 ALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGDATGRFSDGRVPSDLIAEKLGLAKTLPAYMNSYLKPEDLLKGVTFASRGTG-YDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL-----AQAHRYDRTSYANFL 191          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.253e-21
Identity = 53/168 (31.55%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            A  VFGDS++D+GNNN L T  + + PPYG D+P    TGRFS+G    D+I++++G ++    Y++P L  + LL G  FAS G G  +    + +++I ++ QL  F EY  ++    G ++A+ ++  +  L+    ND  + Y      A++ ++   +Y  ++
Sbjct:   30 ALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTG-YDPLTAKIMSVISVWDQLINFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL-----AQTHRYDRTSYANFL 191          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.253e-21
Identity = 53/168 (31.55%), Postives = 94/168 (55.95%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI 665
            A  VFGDS++D+GNNN L T  + + PPYG D+P    TGRFS+G    D+I++++G ++    Y++P L  + LL G  FAS G G  +    + +++I ++ QL  F EY  ++    G ++A+ ++  +  L+    ND  + Y      A++ ++   +Y  ++
Sbjct:   30 ALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLAKTLPAYMNPYLKPEDLLKGVTFASGGTG-YDPLTAKIMSVISVWDQLINFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL-----AQTHRYDRTSYANFL 191          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.408e-20
Identity = 60/145 (41.38%), Postives = 90/145 (62.07%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTA--RADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDF 590
            A F+FGDS +D+GNNNY+ TT   +A+ PPYG  F    PTGRFS+G  I D I++       P P+L P  N Q+ L G NFASAG G L +T     ++I +  QLD++ + +R      G +++++ ++RA+ LI++G ND+
Sbjct:   48 ALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTF-FGLPTGRFSDGRLISDFIAEYANLPLIP-PFLEPG-NSQKKLYGVNFASAGAGALVETFQG--SVINLRTQLDHYKKVERLWRTNFGKEESKKRISRAVYLISIGSNDY 187          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.839e-20
Identity = 54/148 (36.49%), Postives = 80/148 (54.05%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYY 605
            A   FGDS+VD+G NN + T  + D  PYGI+F +   TGRF +G    D++++ +G       YL P L  + LL G +FAS G G  +    + V +I +  QL YF EY  +V  ++G  +   +V  +L L+  G +D  N YY
Sbjct:   43 AVIAFGDSIVDTGMNNNVKTVVKCDFLPYGINFQSGVATGRFCDGRVPADLLAEELGIKSIVPAYLDPNLKSKDLLTGVSFASGGSG-YDPITPKLVAVISLEDQLSYFEEYIEKVKNIVGEARKDFIVANSLFLLVAGSDDIANTYY 189          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL32_ARATH (GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.556e-19
Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  162 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAE-YQRRVSAVIGAQQARQLVNRALVLITVGGNDF 590
            AF+V GDSLVDSGNNN+L T  +++ PPYG DF   + TGRFSNG  I D I+   G    P      +     +  G N+ASAG GIL  TG Q    + +  Q+D F E     +       + R+ +  +L +I +G ND+
Sbjct:   43 AFYVIGDSLVDSGNNNHLTTMVKSNFPPYGSDFEGGKATGRFSNGKTIADYIAIYYGLPLVPAYLGLSQEEKNSISTGINYASAGCGILPQTGRQIGTCLSLSVQVDMFQETITNNLKKNFKKSELREHLAESLFMIAIGVNDY 186          
BLAST of FC920341 vs. ExPASy Swiss-Prot
Match: GDL87_ARATH (GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana GN=At5g55050 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.009e-18
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  144 RLAEARAFFVFGDSLVDSGNNNYLATT-ARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLS------PELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNY 602
            +LA     +VFGDSLVD+GNNNYL  + ++A+ P  G+DFP  +PTGRF NG N  D I+++ G    P PYLS       E      + G NFAS G GI N +  +    I + +Q++ +      V   +    A+  ++++L  + +G ND  + +
Sbjct:   33 KLASIPGLYVFGDSLVDAGNNNYLPISISKANYPHNGVDFPNKKPTGRFCNGKNAADAIAEKFG-LPLPPPYLSLRGLLKREKRKSAAVTGVNFASGGAGIFNSSDQKLGQAIPLSKQVNNWLSIHEEVMK-LEPSAAQLHLSKSLFTVVIGSNDLFDYF 190          
The following BLAST results are available for this feature:
BLAST of FC920341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
GDL30_ARATH4.838e-2137.43GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
EXL2_ARATH4.838e-2135.37GDSL esterase/lipase EXL2 OS=Arabidopsis thaliana ... [more]
GDL63_ARATH6.319e-2147.11GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GDL24_ARATH6.319e-2131.55GDSL esterase/lipase At1g58480 OS=Arabidopsis thal... [more]
GDL26_ARATH8.253e-2131.55GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH8.253e-2131.55GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]
GLIP5_ARATH1.408e-2041.38GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
EXL3_ARATH1.839e-2036.49GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
GDL32_ARATH1.556e-1938.89GDSL esterase/lipase At2g03980 OS=Arabidopsis thal... [more]
GDL87_ARATH1.009e-1835.00GDSL esterase/lipase At5g55050 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32007A11EF RVDevelop1 Citrus clementina cDNA clone C32007A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920341 ID=FC920341; Name=FC920341; organism=Citrus clementina; type=EST; length=671bp
AATCCAAGAAGAGTATATATCCATATATCTAATTAGAGTTTCGAAACAAT
ATGTCAATGGCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTG
GATGATGATTATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTG
CTGAGGCTCGAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGC
AACAACAACTACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGG
GATTGATTTTCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCA
ACATCCCTGACATTATCAGTCAGAGAATTGGCCAATCGGAAGCCCCATTG
CCATACTTGAGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAA
CTTCGCTTCAGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTG
TAAACATAATTAGAATGTTCAGACAATTGGATTACTTCGCGGAGTACCAG
CGTCGAGTGAGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAA
CCGAGCACTAGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACT
ATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAAT
TATGTCAAGTATATCATCTCT
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