FC920345

Overview
NameFC920345
Unique NameFC920345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:141..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_STRAA (Adenosylhomocysteinase OS=Streptomyces argillaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.359e-53
Identity = 108/209 (51.67%), Postives = 137/209 (65.55%), Query Frame = 1
Query:   10 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDW--GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            SA   +FKV DLS A+FGR EI LAE EMPGLM+ R E+  +QP  GA++TGSLHMT+QTAVLIETL ALGA+VRW SCNIFSTQ H                       WKGETL+EYWWCTE+AL W   P GGP++I+DDGGDATLL+H+GV+    YEK GK+P   + +N E ++ L ++   +     K+  +   + GV+EE
Sbjct:    2 SADFTDFKVADLSLAEFGRKEITLAEHEMPGLMSIRREYAEAQPLAGARVTGSLHMTVQTAVLIETLVALGAQVRWASCNIFSTQGHAAAAIAVGPDGTPDNPRAVPVFAWKGETLEEYWWCTEQALTWPDSPTGGPNMILDDGGDATLLVHKGVE----YEKDGKVPSVDTAENDEHRVILELLNRTITDGSQKWTQLASEIRGVTEE 206          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 6.746e-53
Identity = 109/200 (54.50%), Postives = 133/200 (66.50%), Query Frame = 1
Query:    4 QKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            Q  A   +FKV DLS A FGR EI LAE EMPGLM+ R E+  +QP  GA+ITGSLHMT+QTAVLIETL ALGA+VRW SCNI+STQDH              WKGETL+EYWWCTE+AL W    GP++I+DDGGDATLL+H+GV+    Y KTG LP+    +N E    L ++R  L    + +  M   + GV+EE
Sbjct:    4 QPPADFTDFKVADLSLAAFGRKEITLAEHEMPGLMSIREEYAAAQPLAGARITGSLHMTVQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAWKGETLEEYWWCTEQALTWPGHTGPNMILDDGGDATLLVHKGVE----YRKTGILPE---AENEE----LAVVRALLDRSGLDWTAMSSEIRGVTEE 192          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.459e-52
Identity = 108/196 (55.10%), Postives = 133/196 (67.86%), Query Frame = 1
Query:   28 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTD---NAEFQIAL-TIIRDGLKADPMKYHTMKERLVGVSEE 603
            +KV D++ ADFGR EI+LAE EMPGLMA R ++G S+P KGA+I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+STQDH              WKGE L +YWWCT +AL++  G GP++IVDDGGDAT++IH G  AE          D A  D   +AE +I L  I++  L  D  ++H + E + GVSEE
Sbjct:   15 YKVADITLADFGRKEIDLAEKEMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYSTQDHAAAAIAASGVAVFAWKGENLADYWWCTLQALNFPGGKGPNVIVDDGGDATMMIHVGYDAEN---------DAAVLDKEVHAEDEIELNAILKKVLAEDKTRWHRVAEEMRGVSEE 201          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_CHLL2 (Adenosylhomocysteinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.834e-51
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 1
Query:   13 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            A+   +KV D++ A++GR EIE+AE EMPGLMA R ++   +P KGA+ITGSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH              WKGE+L EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E   E   K+P      NAE +     +R+    D  ++H +   + GVSEE
Sbjct:    5 ATALAYKVADITLAEWGRKEIEIAEKEMPGLMATRRKYAGQKPLKGARITGSLHMTIQTAVLIETLVDLGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAWKGESLDEYWWCTRQILEFEDGKGPNLIVDDGGDATLMIHLGYKIENNPELLEKVP-----GNAEEKALYQQLREVYSEDTQRWHKVAAEMKGVSEE 196          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_BACFR (Adenosylhomocysteinase OS=Bacteroides fragilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.835e-51
Identity = 106/193 (54.92%), Postives = 131/193 (67.88%), Query Frame = 1
Query:   28 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIAL-TIIRDGLKADPMKYHTMKERLVGVSEE 603
            +KV D++ ADFGR EI+LAE EMPGLMA R ++G S+P KGA+I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+STQDH              WKGETL +YWWCT +AL++  G GP +IVDDGGDAT++IH G +AE       K        +AE +I L  I++  L  D  ++H +   + GVSEE
Sbjct:   26 YKVADITLADFGRKEIDLAEKEMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYSTQDHAAAAIAASGVAVFAWKGETLADYWWCTLQALNFEGGKGPTVIVDDGGDATMMIHVGYEAENNAAVLDK------EVHAEDEIELNAILKKVLAEDKERWHRVAAEVRGVSEE 212          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.247e-51
Identity = 103/206 (50.00%), Postives = 135/206 (65.53%), Query Frame = 1
Query:   16 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G++    YEK G +P     D+AE+++ L ++R   + D  K+  + E + GV+EE
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDSAEWKVFLGLLRSRFETDKGKWTKIAESVKGVTEE 215          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.247e-51
Identity = 103/206 (50.00%), Postives = 135/206 (65.53%), Query Frame = 1
Query:   16 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G++    YEK G +P     D+AE+++ L ++R   + D  K+  + E + GV+EE
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDSAEWKVFLGLLRSRFETDKGKWTKIAESVKGVTEE 215          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.399e-50
Identity = 103/208 (49.52%), Postives = 135/208 (64.90%), Query Frame = 1
Query:    7 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P     D+AE+++ L ++R+  + D  K+  + E + GV+EE
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKVFLNLLRERFETDKTKWTKIAESVKGVTEE 213          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.399e-50
Identity = 103/208 (49.52%), Postives = 135/208 (64.90%), Query Frame = 1
Query:    7 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P     D+AE+++ L ++R+  + D  K+  + E + GV+EE
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKVFLNLLRERFETDKTKWTKIAESVKGVTEE 213          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.399e-50
Identity = 103/208 (49.52%), Postives = 135/208 (64.90%), Query Frame = 1
Query:    7 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EYWW  E+ L W PG   ++I+DDGGDAT+L+  G +    +EK G +P     D+AE+++ L ++R+  + D  K+  + E + GV+EE
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTW-PGEPANMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKVFLNLLRERFETDKTKWTKIAESVKGVTEE 213          
The following BLAST results are available for this feature:
BLAST of FC920345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_STRAA1.359e-5351.67Adenosylhomocysteinase OS=Streptomyces argillaceus... [more]
SAHH_STRAZ6.746e-5354.50Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_BACTN7.459e-5255.10Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_CHLL22.834e-5152.79Adenosylhomocysteinase OS=Chlorobium limicola (str... [more]
SAHH_BACFR4.835e-5154.92Adenosylhomocysteinase OS=Bacteroides fragilis GN=... [more]
SAHH_MYCUA8.247e-5150.00Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM8.247e-5150.00Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_MYCSS2.399e-5049.52Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK2.399e-5049.52Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSJ2.399e-5049.52Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC32007B04EF RVDevelop1 Citrus clementina cDNA clone C32007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920345 ID=FC920345; Name=FC920345; organism=Citrus clementina; type=EST; length=604bp
GTCCAGAAATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCA
GGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGG
GGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGA
GCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCAT
CGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACA
TCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCC
TCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCAC
GGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCG
ATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAG
GAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAA
CGCCGAGTTTCAGATTGCTTTGACTATCATTAGAGATGGGTTGAAGGCCG
ATCCCATGAAGTACCACACAATGAAGGAAAGATTAGTTGGTGTTTCCGAA
GAAA
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