FC920345

Overview
NameFC920345
Unique NameFC920345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:141..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.224e-47
Identity = 100/199 (50.25%), Postives = 127/199 (63.82%), Query Frame = 1
Query:   10 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHT-MKERLVGVSEE 603
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNI+STQDH               KGE+L++YW  T +  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P S +   F     +++  LK  P  Y   + + + GVSEE
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAEN--GDTAFLDKPGSDEEVIF---FALLKKQLKEKPKGYFAEIAKNIRGVSEE 195          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.224e-47
Identity = 102/194 (52.58%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   22 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +++ V D+  ADFGR EI +AE EMPGLMACR EFG S+P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE        L +P S    E +I    I+  L A P  +   ++ + GV+EE
Sbjct:    5 QDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAE---AGENILTNPGS---EEEEILFAQIKKRLAATPGWFTRQRDAIKGVTEE 192          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.435e-47
Identity = 106/206 (51.46%), Postives = 128/206 (62.14%), Query Frame = 1
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWG----PGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIAL-TIIRDGLKADPMKYHTMKERLVGVSEE 603
            V K     +  V DLS AD+GR EI++AE EMPGLMA R EF  SQP KGA+ITGSLHMTIQTAVL+ETL ALGA+VRW SCNIFSTQDH              +KGETL +YW  T +  D+G     G GP++I+DDGGDATLL+H G KAE       K P   S   +E +  L   I+  L  DP  Y     +++GV+EE
Sbjct:    4 VLKPTPTHDHHVADLSLADWGRKEIKIAETEMPGLMAIRQEFAASQPLKGARITGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALVAAGTPVFAYKGETLTDYWDYTHRIFDFGAKGTDGEGPNMILDDGGDATLLMHLGQKAE-------KDPSVISKPTSEEETCLFAAIKAKLAQDPTWYTRKSAQIIGVTEE 202          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 9.435e-47
Identity = 102/197 (51.78%), Postives = 126/197 (63.96%), Query Frame = 1
Query:   13 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            A+ +++ VKD+S A++GR EI +AE EMPGLMA R EFGPSQP KGA+I GSLHMTIQTAVLI+TL ALGA+VRW SCNI+STQDH              +KGETL+EYW  T++   W  G GP+LI+DDGGDAT+ +  G KAE        L  P S +   F      I+  L A P  +   K  + GVSEE
Sbjct:    5 AAPQDYFVKDISLAEYGRKEIAIAETEMPGLMAAREEFGPSQPLKGARICGSLHMTIQTAVLIQTLEALGAQVRWVSCNIYSTQDHAAAAIADAGTAVFAYKGETLEEYWDYTDRMFQWPDGEGPNLILDDGGDATMYLILGEKAE---SDPSFLEKPTSEEEKYF---FAQIKKRLTASPGWFKKTKAGVRGVSEE 195          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_METEP (Adenosylhomocysteinase OS=Methylobacterium extorquens (strain PA1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.232e-46
Identity = 99/198 (50.00%), Postives = 127/198 (64.14%), Query Frame = 1
Query:   13 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHT-MKERLVGVSEE 603
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   P  +   + + + GVSEE
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEE 194          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.232e-46
Identity = 99/198 (50.00%), Postives = 127/198 (64.14%), Query Frame = 1
Query:   13 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHT-MKERLVGVSEE 603
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P   ++ E ++   +++  L   P  +   + + + GVSEE
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTSKLFDWHDGGMPNMILDDGGDATMFVHLGLRAEN--GDTAFLDKP---ESEEEEVFFALLKKKLAEKPKGWFAGLADSIKGVSEE 194          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_CORGL (Adenosylhomocysteinase OS=Corynebacterium glutamicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.609e-46
Identity = 99/201 (49.25%), Postives = 127/201 (63.18%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH--------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +FKV DLS A+ GR +I LAE EMPGLM  R EF   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFSTQD                       WKGE+L+EYWWC  +   WG    P++I+DDGGDAT+ +  G +    YE+ G +P   + D+ E+   L ++R+ L A+P K+  + E + GV+EE
Sbjct:    2 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRKEFADEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFSTQDEAAAAIVVGSGTVEEPAGVPVFAWKGESLEEYWWCINQIFSWG-DELPNMILDDGGDATMAVIRGRE----YEQAGLVPPAEANDSDEYIAFLGMLREVLAAEPGKWGKIAEAVKGVTEE 197          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_CORGB (Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R) GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.609e-46
Identity = 99/201 (49.25%), Postives = 127/201 (63.18%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH--------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +FKV DLS A+ GR +I LAE EMPGLM  R EF   QP KGA+I GS+HMT+QTAVLIETLTALGAEVRW SCNIFSTQD                       WKGE+L+EYWWC  +   WG    P++I+DDGGDAT+ +  G +    YE+ G +P   + D+ E+   L ++R+ L A+P K+  + E + GV+EE
Sbjct:    6 DFKVADLSLAEAGRHQIRLAEYEMPGLMQLRKEFADEQPLKGARIAGSIHMTVQTAVLIETLTALGAEVRWASCNIFSTQDEAAAAIVVGSGTVEEPAGVPVFAWKGESLEEYWWCINQIFSWG-DELPNMILDDGGDATMAVIRGRE----YEQAGLVPPAEANDSDEYIAFLGMLREVLAAEPGKWGKIAEAVKGVTEE 201          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.102e-46
Identity = 99/193 (51.30%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++ V D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+LQEYW  T +  +W  GG P++I+DDGGDATLL+H G KAE   +    L  P S +          I++ L  D   Y    + + GV+EE
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAFKGESLQEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAE---KDVSVLAHPGSEEET---FLFAAIKEKLAKDATFYSRNLDAIKGVTEE 196          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPW (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH7803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.745e-46
Identity = 97/194 (50.00%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   22 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            +++ + D++QA+FGR E+++AE EMPGLMA R ++G  +P KGA+I GSLHMTIQTA LIETL  LGAEVRW SCNIFSTQDH               KGETL+EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE   +    L +P    N E       I+  L  DP  Y   K ++ GV+EE
Sbjct:   15 QDYVIADINQAEFGRKELDIAETEMPGLMALREKYGTEKPLKGARIAGSLHMTIQTACLIETLVELGAEVRWASCNIFSTQDHAAAAMAARDIPVFAVKGETLEEYWEYTHRILEWGDGGSPNMILDDGGDATGLVMLGSKAE---QDITVLDNPG---NEEETFLFASIKKKLAQDPTFYSRTKAQIQGVTEE 202          
The following BLAST results are available for this feature:
BLAST of FC920345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_RHOP27.224e-4750.25Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHIME7.224e-4752.58Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_METPP9.435e-4751.46Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_HYPNA9.435e-4751.78Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]
SAHH_METEP1.232e-4650.00Adenosylhomocysteinase OS=Methylobacterium extorqu... [more]
SAHH_METC41.232e-4650.00Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_CORGL1.609e-4649.25Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_CORGB1.609e-4649.25Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_RALPJ2.102e-4651.30Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_SYNPW2.745e-4650.00Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC32007B04EF RVDevelop1 Citrus clementina cDNA clone C32007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920345 ID=FC920345; Name=FC920345; organism=Citrus clementina; type=EST; length=604bp
GTCCAGAAATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCA
GGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGG
GGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGA
GCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCAT
CGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACA
TCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCC
TCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCAC
GGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCG
ATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAG
GAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAA
CGCCGAGTTTCAGATTGCTTTGACTATCATTAGAGATGGGTTGAAGGCCG
ATCCCATGAAGTACCACACAATGAAGGAAAGATTAGTTGGTGTTTCCGAA
GAAA
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