FC920345

Overview
NameFC920345
Unique NameFC920345
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:141..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.964e-45
Identity = 101/201 (50.25%), Postives = 126/201 (62.69%), Query Frame = 1
Query:    1 VQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            V  +AS  + KV DLS A +GR EI +AE EMPGLMA R E+  +QP KGA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH              +KGE+L +YW  T + L+W    GP++I+DDGGDATLL+  G +AE   +    L +P      E ++    IR  L A P  Y  ++  + GV+EE
Sbjct:    4 VANAASFDDHKVADLSLAGWGRKEIAIAETEMPGLMAIREEYRAAQPLKGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAADGIPVFAYKGESLDDYWEYTHRILEWPGDVGPNMILDDGGDATLLVTLGARAE---KDASLLANPTC---EEEEVLFAAIRKRLAAKPGWYSRIQAGIKGVTEE 198          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 3.964e-45
Identity = 100/193 (51.81%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++ V DL+ A +GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDH               KGE+L +YW  T +  +W  GG  ++I+DDGGDATLL+H G +AE   +    L  P S    E ++    IR  L +DP  Y      + GV+EE
Sbjct:   10 DYVVADLALAGWGRKEIRIAETEMPGLMAIREEFAVVQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGESLADYWDYTHRIFEWRDGGYSNMILDDGGDATLLLHLGARAE---KDVSVLAKPGS---EEERVLFAAIRAKLASDPTWYSVRLAAIRGVTEE 196          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_VARPS (Adenosylhomocysteinase OS=Variovorax paradoxus (strain S110) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.177e-45
Identity = 102/194 (52.58%), Postives = 123/194 (63.40%), Query Frame = 1
Query:   34 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            + DLS A +GR EI++AE EMPGLMA R EF  +QP KGA+ITGSLHMTIQTAVLIETL ALGA VRW SCNIFSTQDH               KGE+L++YW  T    D+GP    G GP++I+DDGGDATLL+H G +AE   +  G L  P S    E +I    I+  L  DP  Y      ++GV+EE
Sbjct:   17 IADLSLAAWGRKEIKIAETEMPGLMAIREEFSKAQPLKGARITGSLHMTIQTAVLIETLQALGATVRWASCNIFSTQDHAAAAIAAAGTPVFAIKGESLKDYWDYTHAIFDFGPKGSQGEGPNMILDDGGDATLLMHLGQRAE---KDLGVLSKPTS---EEERILYAAIKAKLAVDPTWYTRKSAEIIGVTEE 204          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.177e-45
Identity = 98/193 (50.78%), Postives = 118/193 (61.14%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++ V D+  ADFGR E+ +AE EMPGLMA R + G  +P KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDH               KGETL EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE     +  L +P    N E       IR  L  D   Y  +K  + GV+EE
Sbjct:   16 QYVVADIDLADFGRKELSIAETEMPGLMALRVKHGSEKPLKGARIAGSLHMTIQTGVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFATKGETLDEYWAYTHRILEWGDGGTPNMILDDGGDATGLVMLGSKAE---SDSSVLDNPG---NEEETALFASIRTKLAQDSSFYSRIKSNIQGVTEE 202          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.177e-45
Identity = 98/193 (50.78%), Postives = 120/193 (62.18%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++ V D+S A +GR E+ +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T +  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E ++    I+  L  DP  Y T   ++ GV+EE
Sbjct:   11 DYHVADMSLAAWGRRELAIAETEMPGLMAIREEFAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWQYTHRIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDASVLAKPGS---EEERVLFAAIKATLARDPKWYSTRLAQIRGVTEE 197          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.177e-45
Identity = 101/194 (52.06%), Postives = 122/194 (62.89%), Query Frame = 1
Query:   34 VKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGP----GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            + D+S AD+GR EI +AE EMPGLMA R EF   QP KGA+ITGSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH               KGETL +YW  T +  D+GP    G GP++I+DDGGDATLL+H G +AE   +    L  P S    E +I    I+  L  D   Y     +++GV+EE
Sbjct:   13 IADISLADWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARITGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLVDYWDYTHRIFDFGPKGSEGEGPNMILDDGGDATLLMHLGKRAE---KDASVLAHPGS---EEERILFAAIKAKLAEDSTWYSRKSAQIIGVTEE 200          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.762e-45
Identity = 100/203 (49.26%), Postives = 126/203 (62.07%), Query Frame = 1
Query:    7 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGG----GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            K+    ++ V DLS A +GR EI +AE EMPGLMA R EF   QP KGA++TGSLHMTIQTAVL+ETL ALGA+VRW SCNIFSTQDH              +KGETL +YW  T +  ++G  G    GP++I+DDGGDATLL+H G +AE   +    L +P S +      A   IR  L  DP  Y     +++GV+EE
Sbjct:    6 KALHENDYLVADLSLAAWGRKEIRIAETEMPGLMAIREEFAAKQPLKGARVTGSLHMTIQTAVLVETLQALGAQVRWASCNIFSTQDHAAAALAVQGTPVFAYKGETLADYWDYTHRIFEFGAAGTDGEGPNMILDDGGDATLLMHLGKRAE---KDLSLLDNPKSEEETCLYAA---IRAKLAVDPTWYSRKGAQIIGVTEE 202          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_BORPA (Adenosylhomocysteinase OS=Bordetella parapertussis GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.762e-45
Identity = 97/193 (50.26%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++ V D++ A +GR E+ +AE EMPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E ++    I++ L  DP  Y T   ++ GV+EE
Sbjct:   11 DYIVADMALAGWGRRELAIAETEMPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDISVLAKPGS---EEERVLFAAIKETLARDPKWYSTRLAQIKGVTEE 197          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_BORBR (Adenosylhomocysteinase OS=Bordetella bronchiseptica GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.762e-45
Identity = 97/193 (50.26%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++ V D++ A +GR E+ +AE EMPGLMA R E+  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T K  +W  G   ++I+DDGGDATLL+H G +AE   +    L  P S    E ++    I++ L  DP  Y T   ++ GV+EE
Sbjct:   11 DYIVADMALAGWGRRELAIAETEMPGLMAIRDEYAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAIKGETLEEYWQYTHKIFEWPEGRHANMILDDGGDATLLLHLGARAE---QDISVLAKPGS---EEERVLFAAIKETLARDPKWYSTRLAQIKGVTEE 197          
BLAST of FC920345 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.831e-45
Identity = 97/193 (50.26%), Postives = 119/193 (61.66%), Query Frame = 1
Query:   25 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIALTIIRDGLKADPMKYHTMKERLVGVSEE 603
            ++ V D+  ADFGR E+ +AE EMPGL+A R ++G  +P KGA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDH               KGETL EYW  T + L+WG GG P++I+DDGGDAT L+  G KAE     +  L +P    N E       IR  L  D   Y  +K  + GV+EE
Sbjct:   16 QYVVADIDLADFGRKELSIAETEMPGLIALRIKYGSEKPLKGARIAGSLHMTIQTGVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFATKGETLDEYWAYTHRILEWGDGGTPNMILDDGGDATGLVMLGSKAE---SDSSVLDNPG---NEEETALFASIRTKLAEDSSFYSRIKSSIQGVTEE 202          
The following BLAST results are available for this feature:
BLAST of FC920345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_METCA3.964e-4550.25Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_AZOSE3.964e-4551.81Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_VARPS5.177e-4552.58Adenosylhomocysteinase OS=Variovorax paradoxus (st... [more]
SAHH_PROM35.177e-4550.78Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_BORPD5.177e-4550.78Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_ACISJ5.177e-4552.06Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_LEPCP6.762e-4549.26Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_BORPA6.762e-4550.26Adenosylhomocysteinase OS=Bordetella parapertussis... [more]
SAHH_BORBR6.762e-4550.26Adenosylhomocysteinase OS=Bordetella bronchiseptic... [more]
SAHH_PROMM8.831e-4550.26Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionC32007B04EF RVDevelop1 Citrus clementina cDNA clone C32007B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920345 ID=FC920345; Name=FC920345; organism=Citrus clementina; type=EST; length=604bp
GTCCAGAAATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCA
GGCTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGG
GGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGA
GCCAAGATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCAT
CGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACA
TCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCC
TCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCAC
GGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCG
ATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAG
GAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAA
CGCCGAGTTTCAGATTGCTTTGACTATCATTAGAGATGGGTTGAAGGCCG
ATCCCATGAAGTACCACACAATGAAGGAAAGATTAGTTGGTGTTTCCGAA
GAAA
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